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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I06
         (858 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative / ...   107   1e-23
At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative / ...   104   7e-23
At1g02930.1 68414.m00260 glutathione S-transferase, putative sim...    46   2e-05
At4g02520.1 68417.m00345 glutathione S-transferase, putative           45   7e-05
At2g02930.1 68415.m00241 glutathione S-transferase, putative           44   1e-04
At1g02920.1 68414.m00259 glutathione S-transferase, putative sim...    42   5e-04
At2g02380.1 68415.m00176 glutathione S-transferase, putative sim...    40   0.003
At1g02950.2 68414.m00263 glutathione S-transferase, putative sim...    38   0.006
At1g02950.1 68414.m00262 glutathione S-transferase, putative sim...    38   0.006
At1g02940.1 68414.m00261 glutathione S-transferase, putative sim...    38   0.006
At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1...    38   0.009
At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1...    38   0.009
At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1...    35   0.080
At1g16840.2 68414.m02028 expressed protein                             32   0.56 
At5g46550.1 68418.m05731 DNA-binding bromodomain-containing prot...    29   3.0  
At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kina...    29   3.0  
At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N domain-...    29   3.0  
At1g49430.1 68414.m05541 long-chain-fatty-acid--CoA ligase / lon...    29   3.0  
At3g49210.1 68416.m05378 expressed protein                             29   4.0  
At4g22130.1 68417.m03199 protein kinase family protein contains ...    29   5.2  
At5g20930.1 68418.m02486 protein kinase, putative nearly identic...    28   9.1  
At1g27850.1 68414.m03413 expressed protein similar to En/Spm-lik...    28   9.1  

>At1g09640.1 68414.m01081 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative Similar to elongation factor
           1-gamma (gb|EF1G_XENLA). ESTs
           gb|T20564,gb|T45940,gb|T04527 come from this gene
          Length = 414

 Score =  107 bits (256), Expect = 1e-23
 Identities = 63/150 (42%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
 Frame = +2

Query: 38  VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
           VL+TY  N  A KALIAA+Y G  + V  +F  G TNK+  FLK  P GKVP  E+ +G 
Sbjct: 4   VLHTYKGNKSAEKALIAAEYVGVQIDVPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGS 63

Query: 218 VLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQ 385
           V   ESNAIA YV+    + SL G  L   A++ QW  +S  E+  +   W  P +G M 
Sbjct: 64  VF--ESNAIARYVSRLNGDNSLNGSSLIEYAQIEQWIDFSSLEIYASILRWFGPRMGFMP 121

Query: 386 FNKQNVERAKSDLLAALKVLDGHLLTRTFL 475
           ++    E A S L  AL  L+ HL + T+L
Sbjct: 122 YSAPAEEGAISTLKRALDALNTHLTSNTYL 151



 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 25/69 (36%), Positives = 34/69 (49%)
 Frame = +3

Query: 474 LVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 653
           LV   ITLAD+I    L   F  V+     S   +V+R+F TV +QP  + V+G +    
Sbjct: 151 LVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHVERYFWTVVNQPNFTKVLGDVKQTE 210

Query: 654 APPTYDPKK 680
           A P    KK
Sbjct: 211 AVPPIASKK 219


>At1g57720.1 68414.m06549 elongation factor 1B-gamma, putative /
           eEF-1B gamma, putative similar to elongation factor 1B
           gamma GI:3868758 from [Oryza sativa]
          Length = 413

 Score =  104 bits (250), Expect = 7e-23
 Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 4/150 (2%)
 Frame = +2

Query: 38  VLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
           V++TY  N  A KALIAA+Y+G  ++ + +F  G TNKS +FLK  P GKVP  E+ +G 
Sbjct: 4   VMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTNKSPEFLKMNPIGKVPVLETPEGP 63

Query: 218 VLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQ 385
           +   ESNAIA YV+    + SL G  L   A + QW  +S  E+      W  P +G   
Sbjct: 64  IF--ESNAIARYVSRKNGDNSLNGSSLIEYAHIEQWIDFSSLEIDANMLKWFAPRMGYAP 121

Query: 386 FNKQNVERAKSDLLAALKVLDGHLLTRTFL 475
           F+    E A S L   L+ L+ HL + TFL
Sbjct: 122 FSAPAEEAAISALKRGLEALNTHLASNTFL 151



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 22/69 (31%), Positives = 34/69 (49%)
 Frame = +3

Query: 474 LVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCA 653
           LV   +TLAD++    L   F  V+     S+  +V+R+F T+ +QP+   V+G      
Sbjct: 151 LVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYFWTMVNQPEFKKVLGDAKQTE 210

Query: 654 APPTYDPKK 680
           A P    KK
Sbjct: 211 AVPPVPTKK 219


>At1g02930.1 68414.m00260 glutathione S-transferase, putative
           similar to glutathione S-transferase GI:860955 from
           [Hyoscyamus muticus]
          Length = 208

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +2

Query: 26  MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 205
           MA   ++ +P +    + LIA      D +     +    +K E F+ + P GKVPAFE 
Sbjct: 1   MAGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFED 60

Query: 206 ADGKVLLTESNAIAYYVANE-SLRGGDLATQAR 301
            D K+   ES AI  Y+A+E S +G +L +  +
Sbjct: 61  GDFKIF--ESRAITQYIAHEFSDKGNNLLSTGK 91


>At4g02520.1 68417.m00345 glutathione S-transferase, putative
          Length = 212

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 27/79 (34%), Positives = 41/79 (51%)
 Frame = +2

Query: 26  MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 205
           MA   ++ +P +    + LIA      D ++    +    +K E FL + P G+VPAFE 
Sbjct: 1   MAGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE- 59

Query: 206 ADGKVLLTESNAIAYYVAN 262
            DG + L ES AI  Y+A+
Sbjct: 60  -DGDLKLFESRAITQYIAH 77


>At2g02930.1 68415.m00241 glutathione S-transferase, putative
          Length = 212

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 27/79 (34%), Positives = 41/79 (51%)
 Frame = +2

Query: 26  MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 205
           MA   ++ +P +    + LIA      D ++    +    +K E FL + P G+VPAFE 
Sbjct: 1   MAGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFE- 59

Query: 206 ADGKVLLTESNAIAYYVAN 262
            DG + L ES AI  Y+A+
Sbjct: 60  -DGDLKLFESRAITQYIAH 77


>At1g02920.1 68414.m00259 glutathione S-transferase, putative
           similar to glutathione S-transferase GI:860955 from
           [Hyoscyamus muticus]; supported by cDNA GI:443697.
          Length = 209

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 27/79 (34%), Positives = 39/79 (49%)
 Frame = +2

Query: 26  MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 205
           MA   ++ +P +    + LIA      D +     +    +K E F+ + P GKVPAFE 
Sbjct: 1   MAGIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFE- 59

Query: 206 ADGKVLLTESNAIAYYVAN 262
            DG   L ES AI  Y+A+
Sbjct: 60  -DGDFKLFESRAITQYIAH 77


>At2g02380.1 68415.m00176 glutathione S-transferase, putative
           similar to gi:167970 gb:AAA72320 gb:AY052332
          Length = 223

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
 Frame = +2

Query: 41  LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
           LY+Y  +  A++  IA    G D +  P N + G+ + S DF K  P G VPA    DG 
Sbjct: 14  LYSYWRSSCAHRVRIALTLKGLDYEYIPVNLLKGDQSDS-DFKKINPMGTVPAL--VDGD 70

Query: 218 VLLTESNAIAYYV 256
           V++ +S AI  Y+
Sbjct: 71  VVINDSFAIIMYL 83


>At1g02950.2 68414.m00263 glutathione S-transferase, putative
           similar to glutathione-S-transferase GI:169887 from
           [Silene vulgaris]
          Length = 245

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 146 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLRGGDL 286
           +K+E FL   P G+VP FE  DG V L ES AI  Y+A   S RG  L
Sbjct: 64  HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIAYVHSSRGTQL 109


>At1g02950.1 68414.m00262 glutathione S-transferase, putative
           similar to glutathione-S-transferase GI:169887 from
           [Silene vulgaris]
          Length = 243

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +2

Query: 146 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVAN-ESLRGGDL 286
           +K+E FL   P G+VP FE  DG V L ES AI  Y+A   S RG  L
Sbjct: 62  HKTEPFLSLNPFGQVPVFE--DGSVKLYESRAITQYIAYVHSSRGTQL 107


>At1g02940.1 68414.m00261 glutathione S-transferase, putative
           similar to glutathione S-transferase GI:860955 from
           [Hyoscyamus muticus]
          Length = 256

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 41  LYTYPENFRAYKALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
           +Y YP +    + L      G     +  N + G+  K   FL   P G+VP F   DG 
Sbjct: 41  IYGYPYSTNTRRVLAVLHEKGLSYDPITVNLIAGD-QKKPSFLAINPFGQVPVF--LDGG 97

Query: 218 VLLTESNAIAYYVA 259
           + LTES AI+ Y+A
Sbjct: 98  LKLTESRAISEYIA 111


>At2g02390.2 68415.m00177 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 191

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 41  LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
           LY+Y  +  A++  IA    G D +  P N + G+   S DF K  P G VPA    DG 
Sbjct: 11  LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67

Query: 218 VLLTESNAIAYYV 256
           V++ +S AI  Y+
Sbjct: 68  VVINDSFAIIMYL 80


>At2g02390.1 68415.m00178 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 221

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 41  LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGK 217
           LY+Y  +  A++  IA    G D +  P N + G+   S DF K  P G VPA    DG 
Sbjct: 11  LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDS-DFKKINPMGTVPAL--VDGD 67

Query: 218 VLLTESNAIAYYV 256
           V++ +S AI  Y+
Sbjct: 68  VVINDSFAIIMYL 80


>At2g02390.3 68415.m00179 glutathione S-transferase zeta 1 (GSTZ1)
           (GST18) identical to SP|Q9ZVQ3|GTZ1_ARATH Glutathione
           S-transferase zeta-class 1 (EC 2.5.1.18) (AtGSTZ1)
           (Maleylacetone isomerase) (EC 5.2.1.-) (MAI)
           {Arabidopsis thaliana}; contains Pfam profiles PF02798:
           Glutathione S-transferase, N-terminal domain and
           PF00043:Glutathione S-transferase, C-terminal domain
          Length = 228

 Score = 34.7 bits (76), Expect = 0.080
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
 Frame = +2

Query: 41  LYTYPENFRAYKALIAAQYSGTDVKVAP-NFVFGETNKS------EDFLKKFPAGKVPAF 199
           LY+Y  +  A++  IA    G D +  P N + G+   S      +DF K  P G VPA 
Sbjct: 11  LYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSVYRFDLQDFKKINPMGTVPAL 70

Query: 200 ESADGKVLLTESNAIAYYV 256
              DG V++ +S AI  Y+
Sbjct: 71  --VDGDVVINDSFAIIMYL 87


>At1g16840.2 68414.m02028 expressed protein
          Length = 161

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 26/80 (32%), Positives = 34/80 (42%)
 Frame = +3

Query: 210 MERCF*LKAMPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTANYCLLPALGSSLTLVSCNS 389
           + R F  +A P    LP  V     W+P P SGS  HG+     L+  L + LT     S
Sbjct: 67  VHRIFVRRAQPDW--LPF-VPGASYWVPPPGSGSQSHGIAQ---LVVKLANPLTHEESLS 120

Query: 390 TNRMLNVQSLTYWPP*KYWT 449
           TN      S  Y+    YW+
Sbjct: 121 TNSSHGWPSSDYFLKGSYWS 140


>At5g46550.1 68418.m05731 DNA-binding bromodomain-containing protein
           contains bromodomain, INTERPRO:IPR001487
          Length = 494

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 77  ALIAAQYSGTDVKVAPNFVFGETNKSE 157
           A++ AQY+GT +K     V G+ NK++
Sbjct: 342 AILKAQYAGTIIKAKHRIVLGQNNKAD 368


>At3g14270.1 68416.m01806 phosphatidylinositol-4-phosphate 5-kinase
            family protein similar to SP|Q9Z1T6 FYVE
            finger-containing phosphoinositide kinase (EC 2.7.1.68)
            (1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
            (PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
            profiles PF01504: Phosphatidylinositol-4-phosphate
            5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60
            chaperonin family
          Length = 1791

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 31/109 (28%), Positives = 45/109 (41%)
 Frame = +2

Query: 14   KTPTMAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVP 193
            K+PT  A +L  Y     A K L + + +  DV +  N +FG T K    LK     +  
Sbjct: 1581 KSPTCLAKILGIYQV---ATKQLKSGKETKMDVLIMENLLFGRTVKRLYDLKGSSRARYN 1637

Query: 194  AFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELL 340
               S   KVLL + N I     +    G       R+ + A W+D+  L
Sbjct: 1638 PDSSGSNKVLL-DQNLIEAMPTSPIFVGN---KAKRLLERAVWNDTAFL 1682


>At2g33000.1 68415.m04044 ubiquitin-associated (UBA)/TS-N
           domain-containing protein-related contains weak hit to
           Pfam F00627: UBA/TS-N domain; supported by tandem
           duplication of ubiquitin-associated (UBA)/TS-N domain
           protein (GI:2924790) (TIGR_Ath1:At2g33010) [Arabidopsis
           thaliana]
          Length = 508

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +3

Query: 372 LVSCNSTNRMLNVQSLTYWPP*KYWTDIFSHAPSLVTE 485
           L++ +  N   N +S + WPP K W D   H   +  E
Sbjct: 195 LMASSQVNTQENQESTSVWPPMKTWVDRICHETKVSRE 232


>At1g49430.1 68414.m05541 long-chain-fatty-acid--CoA ligase /
           long-chain acyl-CoA synthetase nearly identical to acyl
           CoA synthetase (MF45P) GI:1617268 from [Brassica napus]
          Length = 665

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 577 FISDERTLGSSTCWKACSSVLKTMTSASVILSVTKEGA 464
           F+ ++      +C K CSS LKT+ S   + S  KE A
Sbjct: 156 FVQEKTVSSILSCQKGCSSNLKTIVSFGEVSSTQKEEA 193


>At3g49210.1 68416.m05378 expressed protein
          Length = 518

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +2

Query: 281 DLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 460
           D+  +    +W +W    + P S       L  ++  K+ ++R K+ L AAL  + G  +
Sbjct: 352 DMMAKGSTCRWGNWIGYIVFPFSIGLRDDPLQHLRRAKRIIDRKKNSLEAALTFVAGKFI 411

Query: 461 TRTF 472
            +TF
Sbjct: 412 LKTF 415


>At4g22130.1 68417.m03199 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 338

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
 Frame = +2

Query: 65  RAYKALIAAQYSGTDVKVAPNF-----VFGETNKSEDFLKKFPAGKVPAFESADGKVL-L 226
           R    + A+QY+ + ++VA N      + GE +    +  +FP GK+ A +  D   L L
Sbjct: 8   RIRSPITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSL 67

Query: 227 TESNAIAYYVANES 268
            E +     V+N S
Sbjct: 68  QEEDNFLEAVSNMS 81


>At5g20930.1 68418.m02486 protein kinase, putative nearly identical
           to protein kinase tousled gi|433052|gb|AAA32874
          Length = 688

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 9/37 (24%), Positives = 24/37 (64%)
 Frame = -2

Query: 116 LSHQSRNIVRRSTLYKRGSFPDKCKVPRPPWLEFSER 6
           +S+++++++RR   Y +   PD   + + P+L +S++
Sbjct: 652 ISNEAKDLIRRCLTYNQEDRPDVLTMAQDPYLAYSKK 688


>At1g27850.1 68414.m03413 expressed protein similar to En/Spm-like
           transposon protein GB:AAB95292 GI:2088658 from
           [Arabidopsis thaliana]
          Length = 1148

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 639 ASRRRPTLAAGGRRSGTNAERLSATNGR 556
           +S R P+  A GRRSGT   R+S T G+
Sbjct: 171 SSARHPS-PASGRRSGTPVRRISPTPGK 197


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,906,067
Number of Sequences: 28952
Number of extensions: 413445
Number of successful extensions: 1183
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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