Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I05
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 241 6e-64
03_06_0179 - 32171712-32171780,32171861-32171920,32172096-321721... 128 5e-30
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 62 7e-10
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 56 3e-08
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 56 3e-08
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 42 5e-04
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 41 0.001
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 39 0.004
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 34 0.16
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 33 0.22
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 33 0.29
08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,626... 33 0.29
05_07_0148 + 28024820-28025293,28025655-28025702,28026034-280260... 33 0.29
07_01_0075 - 558829-560859 33 0.38
06_01_0668 - 4882174-4884204 33 0.38
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 32 0.66
06_03_0823 - 25026949-25027551,25027635-25027742,25027994-250281... 31 1.2
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 31 1.5
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 31 1.5
12_02_1133 - 26368323-26369457,26369556-26369635,26370145-263702... 30 2.0
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 30 2.0
04_04_0443 - 25253425-25253679,25254072-25254131,25254259-252543... 30 2.7
04_01_0574 - 7450124-7450525,7450957-7451322 30 2.7
02_05_0077 + 25645730-25645993,25647172-25647648,25648027-256482... 30 2.7
12_01_0199 - 1467137-1467172,1467302-1467391,1468304-1468396,146... 29 3.5
04_04_1635 - 34943881-34945233,34945321-34945524 29 3.5
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 29 4.7
11_06_0391 - 23071997-23072278,23074390-23074476,23074623-23075003 29 6.2
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 29 6.2
04_01_0061 + 617966-618025,618619-618780 29 6.2
12_01_0359 + 2736797-2737050,2737801-2738153,2738583-2738821,273... 28 8.1
05_02_0033 + 5847754-5847982,5848308-5848437,5849038-5849116,584... 28 8.1
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 28 8.1
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 241 bits (589), Expect = 6e-64
Identities = 113/190 (59%), Positives = 149/190 (78%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKVPA 331
+VG+PNVGKSTFFN++TK AENFPFCTIDPNE+RV VPDER+D+LC+ +KP S+V A
Sbjct: 1 MVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEVSA 60
Query: 332 FLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLE 511
+L + DIAGLVRGA G+GLGNAFLSHI+A D IF++ RAF+D++V H+D V+PVRDLE
Sbjct: 61 YLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVRDLE 120
Query: 512 TIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKHIXFGDWS 691
TI EELRLKD E + I+ L++ + R +K+LK E++ KVK L ++ K + FGDW
Sbjct: 121 TIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLKLEHELCEKVKAHL-EDGKDVRFGDWK 179
Query: 692 AADIEV*INT 721
+ADIE+ +NT
Sbjct: 180 SADIEI-LNT 188
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +1
Query: 709 LNKYLFLTSKPALYLVXLSEKDYXXKKN 792
LN + LT+KP +YLV +SEKDY KKN
Sbjct: 186 LNTFQLLTAKPVVYLVNMSEKDYQRKKN 213
>03_06_0179 -
32171712-32171780,32171861-32171920,32172096-32172166,
32172246-32172273,32172356-32172502,32172626-32172904,
32172949-32173011,32173137-32173247,32173605-32173658,
32173761-32173949,32174275-32174670
Length = 488
Score = 128 bits (309), Expect = 5e-30
Identities = 64/162 (39%), Positives = 99/162 (61%), Gaps = 10/162 (6%)
Frame = +2
Query: 209 QAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKVPAFLNVVDIAGLVRGAAEGQG 388
+A A NFPFCTI+PN V +PD R L + K +P + +VDIAGLV+GA++G+G
Sbjct: 137 KAQAANFPFCTINPNVGVVAIPDARLHVLSKLSKSKETIPTSIELVDIAGLVKGASKGEG 196
Query: 389 LGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIE 568
LGN FLS+I+ D+I + R F+D+D++HV G V+P D++ I EL D +Q+ + ++
Sbjct: 197 LGNQFLSNIREVDSILQVVRCFEDDDIVHVSGKVDPKSDIDVINLELIFSDLDQIEKRLD 256
Query: 569 KLDRVVNRGGEKKLK----------PEYDSLAKVKTILVDEK 664
KL + + + K+K E L K++T+L+D K
Sbjct: 257 KLKKSKTKDQQVKVKIPTVLTTQEQAERTGLEKIQTVLMDGK 298
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 125 RVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAAENFPF 235
R+ +L+ GIVG+PNVGKST FN + ++ +A + F
Sbjct: 56 RISMSLRAGIVGLPNVGKSTLFNAIVRNLPSASSEEF 92
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 61.7 bits (143), Expect = 7e-10
Identities = 43/136 (31%), Positives = 70/136 (51%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
VG+VG+PN GKST + +T ++ ++PF T+ PN R+ D L ++ A+
Sbjct: 279 VGLVGLPNAGKSTLLSAITLARPDIADYPFTTLMPNLGRLG-GDPALGAL-QFSSEAT-- 334
Query: 326 PAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRD 505
+ D+ GL+ GA G+GLG FL H++ I ++ A D+ PV D
Sbjct: 335 -----LADLPGLIEGAHLGKGLGRNFLRHLRRTRVIVHVVDAAADD----------PVDD 379
Query: 506 LETIAEELRLKDEEQL 553
+ + EELR+ + + L
Sbjct: 380 YKIVREELRMYNPQYL 395
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/91 (36%), Positives = 50/91 (54%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
VG+VG+PN GKST + L++++ ++ F T+ PN + DY
Sbjct: 342 VGLVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYE----DYFS--------- 388
Query: 326 PAFLNVVDIAGLVRGAAEGQGLGNAFLSHIK 418
+ V DI GL++GA E +GLG+AFL HI+
Sbjct: 389 ---VKVADIPGLIKGAHENRGLGHAFLRHIE 416
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/99 (34%), Positives = 50/99 (50%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
VGIVG PN GKST ++ ++ N+PF T+ PN V + D+
Sbjct: 455 VGIVGAPNAGKSTLLTAISAAKPTIANYPFTTLLPNLGVVSL-----DF----------- 498
Query: 326 PAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNL 442
A + V D+ GL+ GA G GLG+ FL H + C + ++
Sbjct: 499 DATMVVADLPGLLEGAHRGYGLGHEFLRHSERCSVLVHV 537
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 42.3 bits (95), Expect = 5e-04
Identities = 27/107 (25%), Positives = 54/107 (50%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 322
+V ++G P+VGKST +LT + + A ++ F T+ +P + +Y+
Sbjct: 64 RVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTL------TCIPG-----IIQYNDTK-- 110
Query: 323 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDE 463
+ ++D+ G++ GA+EG+G G ++ K+ D + + A E
Sbjct: 111 ----IQLLDLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVLDASKSE 153
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/97 (28%), Positives = 48/97 (49%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 322
+VG+VG P+VGKST N LT + + + F T+ +P +K A
Sbjct: 77 RVGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTL------TCIPG------VIMYKGAK- 123
Query: 323 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAI 433
+ ++D+ G++ GA +G+G G +S + C+ I
Sbjct: 124 ----IQLLDLPGIIEGAKDGKGRGRQVISTARTCNVI 156
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRV 265
V +VG N GKST N LT + AE+ F T+DP RV
Sbjct: 256 VSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRV 295
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVP 274
V +VG N GKST + L+++ +++ F T+DP V +P
Sbjct: 290 VAVVGYTNAGKSTLVSALSETDLYSDDRLFATVDPRLRSVILP 332
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 33.5 bits (73), Expect = 0.22
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTKSQ 211
+ VGIVG+PNVGKS+ N L +S+
Sbjct: 269 ITVGIVGLPNVGKSSLINSLKRSR 292
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 134 TNLKVGIVGVPNVGKSTFFNVLTKSQAA 217
+ L+V I+G PNVGKS+ N +KS+ A
Sbjct: 304 SGLQVAIIGRPNVGKSSLLNAWSKSERA 331
>08_01_0709 +
6265949-6266452,6267697-6267786,6268257-6268402,
6268534-6268710,6268774-6268840,6268949-6269056,
6269718-6269732
Length = 368
Score = 33.1 bits (72), Expect = 0.29
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 137 NLKVGIVGVPNVGKSTFFNVLTKSQAAA 220
+L VGIVG PN GKS+ N + ++ AA
Sbjct: 148 SLSVGIVGAPNAGKSSLTNTMVGTKVAA 175
>05_07_0148 +
28024820-28025293,28025655-28025702,28026034-28026080,
28026334-28026496,28026595-28026656,28026820-28027003,
28027093-28027182,28027553-28027686,28027747-28027936,
28028103-28029033,28029860-28030065
Length = 842
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +2
Query: 518 AEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVK 643
A E+ +KD++QLLQ +E+L V++R +++ K + AK K
Sbjct: 287 AVEVNVKDDDQLLQEMEELTSVIDRKKKREKKRQSKRRAKDK 328
>07_01_0075 - 558829-560859
Length = 676
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
I G PNVGKS+F N +T++ + + F T
Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTT 202
>06_01_0668 - 4882174-4884204
Length = 676
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
I G PNVGKS+F N +T++ + + F T
Sbjct: 173 ICGYPNVGKSSFMNKITRADVDVQPYAFTT 202
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTKSQ 211
L++ IVG PNVGKST N L + Q
Sbjct: 312 LQLAIVGRPNVGKSTLLNTLLQEQ 335
>06_03_0823 -
25026949-25027551,25027635-25027742,25027994-25028107,
25028200-25028309,25028432-25028520,25028637-25028833,
25028961-25029122,25029255-25029373,25029488-25029541,
25029687-25029769,25029894-25029982,25030105-25030257,
25030373-25030465,25032070-25032136,25032238-25032350,
25033466-25033561,25034415-25034594
Length = 809
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 230 PFCTIDPNESRVPVPDERYDYLCEYHKPASKVPAFLNVVDIAGLVRGAA--EGQGLGNAF 403
P CT D N VP+ Y + PA + VVD+ GL +G A G LG +
Sbjct: 588 PGCTWDNNNGTVPINKPFTWYKTTFQAPAGEDTV---VVDLLGLNKGVAWVNGNNLGRYW 644
Query: 404 LSHIKACDAIFNLCRAFDDEDVIHVDGD 487
S+ A C D V +GD
Sbjct: 645 PSYTA---AEMGGCHHCDYRGVFQAEGD 669
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
+VG PNVGKS+ +L+ + ++PF T
Sbjct: 249 LVGSPNVGKSSLVRILSSGKPEVCSYPFTT 278
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTK 205
++ GIVG PNVGKS+ N L K
Sbjct: 401 VRAGIVGYPNVGKSSLINRLLK 422
>12_02_1133 -
26368323-26369457,26369556-26369635,26370145-26370201,
26370508-26370601,26371006-26371092,26371179-26371268,
26371396-26371649
Length = 598
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 119 IGRVGTNLKVGIVGVPNVGKSTFFNVL 199
+ V ++ VG VG PNVGKS+ N L
Sbjct: 307 VSSVAKHVVVGFVGYPNVGKSSTINAL 333
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRV 265
+ VG VG PNVGKS+ N L +S++ + P P E++V
Sbjct: 317 ISVGFVGYPNVGKSSVINTL-RSKSVCKVAPI----PGETKV 353
>04_04_0443 -
25253425-25253679,25254072-25254131,25254259-25254365,
25256594-25256667,25256865-25256998,25257233-25257304,
25257453-25257522,25257602-25257675,25258403-25258574,
25258910-25258934,25259358-25259517,25259730-25259788,
25259908-25260079
Length = 477
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -1
Query: 358 TGYVYHVEESWHFACW---FMIFA-*VVIPFI 275
T ++ V SWH CW F+++A ++IPFI
Sbjct: 90 TRKLHEVRNSWHSGCWILKFLVYAVSIIIPFI 121
>04_01_0574 - 7450124-7450525,7450957-7451322
Length = 255
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 410 HIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETI 517
H K C +F L A+DD++ +GD P D ET+
Sbjct: 156 HNKVCKCLFLLDLAYDDDE--EDEGDTTPAADPETL 189
>02_05_0077 +
25645730-25645993,25647172-25647648,25648027-25648237,
25648407-25648564,25648641-25648711,25648829-25648934,
25649008-25649094,25649701-25650252,25650337-25650403,
25650971-25651104,25651175-25651228,25651376-25651472,
25652007-25652212,25652287-25652367,25652543-25652608,
25653025-25653098,25653766-25653871
Length = 936
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 431 IFNLCRAFDDE-DVIH--VDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGE 601
+ N R+F+D D + + + +P R IAE R +D++ +L+ + D+V + G
Sbjct: 150 VANTTRSFEDRIDALQRKLSNETDPQRINGMIAEIKRYQDDKSILKQYIEGDQVYDDGKM 209
Query: 602 KKLKPE 619
K++PE
Sbjct: 210 YKVQPE 215
>12_01_0199 -
1467137-1467172,1467302-1467391,1468304-1468396,
1468488-1469515,1470005-1470552,1470656-1470695,
1473774-1475196
Length = 1085
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 533 LKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILV 655
LK + + + + +++RVV EK+L+ EY+S K+ I++
Sbjct: 742 LKSDLDIGRFLNRVERVVEEKREKELQSEYESRKKLPRIMM 782
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 524 ELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSL 631
++ + DEE L+ + ++ ++NRGGEK E DS+
Sbjct: 393 DIGVVDEEGYLRLVGRIKELINRGGEKISPIEVDSV 428
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAA 217
+V I+G PNVGKS FN L A
Sbjct: 162 RVAIIGRPNVGKSALFNRLVGGNRA 186
>11_06_0391 - 23071997-23072278,23074390-23074476,23074623-23075003
Length = 249
Score = 28.7 bits (61), Expect = 6.2
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Frame = +2
Query: 314 ASKVPAFLNVVDIAGLVRGAAEGQGL--GNAFLSHIK---ACDAIFNLCRAFDDEDVIHV 478
AS A L +V A +RG+ E QGL N ++ + A + L F+++ V +
Sbjct: 106 ASSPLAVLELVSTALRLRGSGEVQGLLAVNQIVNRDETGAAMAEVSELLTTFNEQVVFEI 165
Query: 479 DGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRG-GEKKLKPEYDSL-AKVKT 646
D L T +K E++ Q+ + ++ G G+KKL +++L K+KT
Sbjct: 166 PKDCISNDPLVTERNTKLVKFYEEIAQNRYQRYHLIEAGAGKKKLTKSWENLQTKLKT 223
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 194 VLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
+L+++ AE FPF DPN VP +RY L KP +V
Sbjct: 381 LLSETMQPAEIFPFIMRDPNRWSDLVPRKRYWGLHAPPKPLEEV 424
>04_01_0061 + 617966-618025,618619-618780
Length = 73
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +2
Query: 440 LCRAFDDEDVIHVDGDVNPV-RDLETIAEEL 529
L A DD V+HVDGDV V RD+ AE L
Sbjct: 25 LAGAVDDAGVVHVDGDVEGVHRDVLHEAELL 55
>12_01_0359 +
2736797-2737050,2737801-2738153,2738583-2738821,
2738916-2739035,2739115-2739162
Length = 337
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 533 LKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILV 655
L E +++ DRVV +K++K EY+S K+ IL+
Sbjct: 154 LNCELNIVRFFHHFDRVVQGKRDKEIKSEYESRKKLPRILM 194
>05_02_0033 +
5847754-5847982,5848308-5848437,5849038-5849116,
5849194-5849251,5849732-5850795,5850899-5851003,
5851369-5851473
Length = 589
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 524 ELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTI 649
++ LK +++ +RVV + KLK EY+S K+ I
Sbjct: 234 KIHLKSSLDIIRFFNHFERVVKGKRDNKLKSEYESREKLSRI 275
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVL 199
VG VG PNVGKS+ N L
Sbjct: 333 VGFVGYPNVGKSSTINAL 350
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,781,644
Number of Sequences: 37544
Number of extensions: 355348
Number of successful extensions: 1282
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -