Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I05
(847 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53185| Best HMM Match : RWD (HMM E-Value=4.8e-26) 76 4e-14
SB_14133| Best HMM Match : TGS (HMM E-Value=2.2e-36) 43 3e-04
SB_43010| Best HMM Match : MMR_HSR1 (HMM E-Value=1.9e-05) 37 0.024
SB_52102| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_2336| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_2976| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8e-19) 36 0.055
SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_57810| Best HMM Match : MMR_HSR1 (HMM E-Value=3.6e-07) 31 1.2
SB_6025| Best HMM Match : MMR_HSR1 (HMM E-Value=1.1e-17) 31 1.2
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_50712| Best HMM Match : MMR_HSR1 (HMM E-Value=3.5) 30 2.7
SB_37894| Best HMM Match : DUF16 (HMM E-Value=9.4) 30 2.7
SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_11961| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_56785| Best HMM Match : TGS (HMM E-Value=6.2e-31) 29 6.3
SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_58975| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_39561| Best HMM Match : ELMO_CED12 (HMM E-Value=2.52234e-44) 28 8.3
SB_13700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_53185| Best HMM Match : RWD (HMM E-Value=4.8e-26)
Length = 534
Score = 75.8 bits (178), Expect = 4e-14
Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTK-SQAAAENFPFCTIDPNESR----VPVPDERYDYLCEY-H 307
+G++G P+ GKSTFFN T+ ++A + PF TI+PN R +P P C +
Sbjct: 155 IGLIGKPSAGKSTFFNAATQQNRARVASHPFTTIEPNIGRGFYAIPCPCGTLSKQCNAAY 214
Query: 308 KPASKVPAFLNVV--DIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVD 481
A ++ V+ D+AGLV GA EG+G GN F++ + D + ++ A + D +
Sbjct: 215 GHADNGDRYVPVILKDVAGLVPGACEGRGKGNKFMNDLLDADVLIHVIDASGETDENGKE 274
Query: 482 -GDVNPVRDLETIAEEL 529
D +P +D+E + EEL
Sbjct: 275 TSDYDPSQDVEWLYEEL 291
>SB_14133| Best HMM Match : TGS (HMM E-Value=2.2e-36)
Length = 365
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/107 (26%), Positives = 54/107 (50%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 322
+V ++G P+VGKST LT++Q+A ++ F T+ +P + Y+
Sbjct: 65 RVALIGFPSVGKSTLLTKLTQTQSACASYEFTTL------TCIPG-----VINYN----- 108
Query: 323 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDE 463
A + ++D+ G++ GAA+G+G G ++ + D + + A E
Sbjct: 109 -GANIQLLDLPGIIEGAAQGKGRGRQVIAVARTADLVLMMLDASKGE 154
>SB_43010| Best HMM Match : MMR_HSR1 (HMM E-Value=1.9e-05)
Length = 141
Score = 36.7 bits (81), Expect = 0.024
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTI 244
+V ++G P+VGKST LT++Q+A ++ F T+
Sbjct: 65 RVALIGFPSVGKSTLLTKLTQTQSACASYEFTTL 98
>SB_52102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 36.3 bits (80), Expect = 0.031
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 572 LDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKHIXFGDWSA 694
+++ V RGG+KK E + + K+ + +EKK + FG W+A
Sbjct: 5 MEKTVVRGGDKKRMGELEIMKKLLHWVAEEKKDLRFGTWNA 45
>SB_2336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 47
Score = 36.3 bits (80), Expect = 0.031
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 572 LDRVVNRGGEKKLKPEYDSLAKVKTILVDEKKHIXFGDWSA 694
+++ V RGG+KK E + + K+ + +EKK + FG W+A
Sbjct: 5 MEKTVVRGGDKKRMGELEIMKKLLHWVAEEKKDLRFGTWNA 45
>SB_2976| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8e-19)
Length = 255
Score = 35.5 bits (78), Expect = 0.055
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 155 VGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPD 277
VG PN GKST ++++ +PF T++P+ V D
Sbjct: 1 VGFPNAGKSTLLRAISRATPTVAAYPFTTLNPSVGMVEYDD 41
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 341 VVDIAGLVRGAAEGQGLGNAFLSHIKAC 424
V DI GL+ A +GLG+ FL HI+ C
Sbjct: 136 VADIPGLIPDAHLNKGLGHTFLRHIERC 163
>SB_24089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 128 VGTNLKVGIVGVPNVGKSTFFNVLTKSQ 211
+ T++ VG+VG PNVGKS+ N L +S+
Sbjct: 452 IKTSITVGVVGFPNVGKSSIINSLKRSR 479
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -2
Query: 222 SAAA*LLVRTLKNVDFPTLGTPTIPTFKLVPT 127
S A LLVR L+ + PTL TPT P K PT
Sbjct: 209 SCLATLLVRPLETIPAPTLTTPTSPALKETPT 240
>SB_7927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 31.9 bits (69), Expect = 0.67
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
+ G PNVGKS+F N +T++ + + F T
Sbjct: 88 VCGFPNVGKSSFMNKVTRADVDVQPYAFTT 117
>SB_57810| Best HMM Match : MMR_HSR1 (HMM E-Value=3.6e-07)
Length = 299
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAA 220
+G+VG PNVGKS+ N + +S+ A
Sbjct: 163 IGLVGYPNVGKSSTINTILQSKKVA 187
>SB_6025| Best HMM Match : MMR_HSR1 (HMM E-Value=1.1e-17)
Length = 98
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFN-VLTKSQAAAENFPFCTID 247
V +VG PNVGKST N +L + A ++ P T D
Sbjct: 24 VAVVGRPNVGKSTLVNRILGRRAAVVQDVPGVTRD 58
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTKSQAAA 220
LKV I+G PN GKST N L + A
Sbjct: 40 LKVAIIGEPNSGKSTLINQLVGEKIVA 66
>SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVL 199
+ VG++G PNVGKS+ N L
Sbjct: 168 ISVGLIGYPNVGKSSIINTL 187
>SB_50712| Best HMM Match : MMR_HSR1 (HMM E-Value=3.5)
Length = 94
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 332 FLNVVDIAGLVRGAAEGQGLGNAFLSHIK 418
+++V D+ GLV GA +G+ + FL H++
Sbjct: 58 YISVADLPGLVEGAHLNRGMVHKFLKHVE 86
>SB_37894| Best HMM Match : DUF16 (HMM E-Value=9.4)
Length = 244
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 222 SAAA*LLVRTLKNVDFPTLGTPTIPTFKLV 133
S AA V +K++DFP LG P I KLV
Sbjct: 175 SRAAEQYVYVIKDLDFPLLGRPAIEQLKLV 204
>SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 497 VRDLETIAE--ELRLKDEEQLLQ-HIEKLDRVVNRGGEKKLKPEYDSLAKVK 643
+RDL ++E E+RLK E++ +Q ++ ++R+ E K DSL K+K
Sbjct: 473 MRDLHKMSEDEEVRLKREQERIQNYLTHIERLATEIDESAHKINTDSLIKIK 524
>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3306
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 539 DEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTIL 652
D E++ + EK V RGGEK+L+ ++AKV+ ++
Sbjct: 867 DVEEIKRRFEKHSEAV-RGGEKELRNSNKTMAKVREVM 903
>SB_11961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 554
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Frame = +2
Query: 218 AENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKVPAFLNVVDIAGLVRGAAEGQGLGN 397
A+ P T+D S V P R +C+ + +VV GL GL +
Sbjct: 36 AQEAPSNTLDRARSVVRYPSPRPSLICDGLADVVRCDGLADVVRCDGLA-DVVRCDGLAD 94
Query: 398 AF----LSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVR 502
L+ + CD + ++ R DV+ DG + VR
Sbjct: 95 VVRCDGLADVVRCDGLADVVRCDGLADVVRCDGLADVVR 133
>SB_56785| Best HMM Match : TGS (HMM E-Value=6.2e-31)
Length = 303
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNESR 262
++G VG P+VGKST L S+ AA F T P R
Sbjct: 50 RIGFVGFPSVGKSTLLTNLAGVYSEVAAYEFTTLTTVPGVIR 91
>SB_15331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 536 KDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEK 664
KD+ + + EKL R + + EK P DS K+K V++K
Sbjct: 151 KDKSSVPGNTEKLKRHLKKSKEKTKTPTADSKVKIKEEKVEKK 193
>SB_58975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 289 VIPFIRYRYPTLIRVDGAER-KVFSCCLTLG 200
++PF +YRY +IR D R + +SC TLG
Sbjct: 152 ILPFDKYRYHPVIRRDNHIRLRKYSCPETLG 182
>SB_39561| Best HMM Match : ELMO_CED12 (HMM E-Value=2.52234e-44)
Length = 520
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 206 SQAAAENFPFCTIDPNESRVPVPDERYDYLCEY 304
SQ A+NFPFC + N +R+ + R L +Y
Sbjct: 382 SQHEAQNFPFCVMSINITRIALQTLREGKLNKY 414
>SB_13700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -1
Query: 517 NCLQVSYRIYVTVNMDDVFIIECTTQVK 434
N VSYR Y N+DD F I+CT K
Sbjct: 249 NDADVSYRCYNPDNVDDRFGIQCTKNGK 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,653,741
Number of Sequences: 59808
Number of extensions: 407269
Number of successful extensions: 3452
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3449
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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