Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I05
(847 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30580.1 68414.m03741 expressed protein 257 8e-69
At1g56050.1 68414.m06436 GTP-binding protein-related similar to ... 163 1e-40
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 62 3e-10
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 54 1e-07
At5g57960.1 68418.m07252 GTP-binding family protein similar to S... 42 4e-04
At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 42 4e-04
At1g72660.1 68414.m08403 developmentally regulated GTP-binding p... 42 7e-04
At1g17470.1 68414.m02143 developmentally regulated GTP-binding p... 42 7e-04
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 35 0.078
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 35 0.078
At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi... 33 0.24
At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa... 33 0.32
At1g80770.1 68414.m09476 expressed protein 33 0.32
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 32 0.42
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 32 0.55
At3g48520.1 68416.m05296 cytochrome P450 family protein similar ... 31 0.73
At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa... 31 0.73
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 31 0.73
At5g40550.1 68418.m04921 expressed protein 31 0.96
At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa... 31 0.96
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 30 2.2
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 30 2.2
At5g50690.1 68418.m06281 short-chain dehydrogenase/reductase (SD... 29 2.9
At5g50590.1 68418.m06267 short-chain dehydrogenase/reductase (SD... 29 2.9
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 29 2.9
At4g37440.1 68417.m05299 expressed protein 29 3.9
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 29 3.9
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 29 5.1
At3g47450.2 68416.m05160 expressed protein 29 5.1
At3g47450.1 68416.m05159 expressed protein 29 5.1
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 29 5.1
At3g57180.1 68416.m06366 expressed protein 28 6.8
At3g21100.1 68416.m02667 RNA recognition motif (RRM)-containing ... 28 6.8
At2g27200.1 68415.m03269 GTP-binding family protein contains Pfa... 28 6.8
At1g08410.1 68414.m00930 GTP-binding family protein contains Pfa... 28 6.8
At5g66470.1 68418.m08382 expressed protein 28 9.0
At4g38730.1 68417.m05486 expressed protein 28 9.0
At2g46640.1 68415.m05818 hypothetical protein and genefinder; e... 28 9.0
>At1g30580.1 68414.m03741 expressed protein
Length = 394
Score = 257 bits (629), Expect = 8e-69
Identities = 121/202 (59%), Positives = 158/202 (78%)
Frame = +2
Query: 116 LIGRVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYL 295
++GR ++LK+GIVG+PNVGKST FN LTK AENFPFCTI+PNE+RV +PDER+D+L
Sbjct: 17 ILGRFSSHLKIGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEARVNIPDERFDWL 76
Query: 296 CEYHKPASKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIH 475
C+ +KP S++PAFL + DIAGLVRGA EGQGLGN FLSHI+A D IF++ RAF+D D+IH
Sbjct: 77 CQTYKPKSEIPAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADIIH 136
Query: 476 VDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILV 655
VD V+PVRDLETI EELRLKD E + + I+ +++ + R +K+LK E + L KVK L
Sbjct: 137 VDDIVDPVRDLETITEELRLKDIEFVGKKIDDVEKSMKRSNDKQLKIELELLQKVKAWL- 195
Query: 656 DEKKHIXFGDWSAADIEV*INT 721
++ K + FGDW ADIE+ +NT
Sbjct: 196 EDGKDVRFGDWKTADIEI-LNT 216
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +1
Query: 709 LNKYLFLTSKPALYLVXLSEKDYXXKKN 792
LN + L++KP +YL+ L+E+DY KKN
Sbjct: 214 LNTFQLLSAKPVVYLINLNERDYQRKKN 241
>At1g56050.1 68414.m06436 GTP-binding protein-related similar to
GTP-binding protein GI:10176676 from [Bacillus
halodurans]
Length = 421
Score = 163 bits (397), Expect = 1e-40
Identities = 83/183 (45%), Positives = 119/183 (65%), Gaps = 3/183 (1%)
Frame = +2
Query: 125 RVGTNLKVGIVGVPNVGKSTFFN-VLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCE 301
+V +LK GIVG+PNVGKST FN V+ +A A NFPFCTI+PN V VPD R L +
Sbjct: 49 KVSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAANFPFCTIEPNVGIVAVPDSRLQVLSK 108
Query: 302 YHKPASKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVD 481
VPA + VDIAGLV+GA++G+GLGN FLSHI+ D+I + R F+D D+IHV+
Sbjct: 109 LSGSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIIHVN 168
Query: 482 GDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYD--SLAKVKTILV 655
G V+P D++ I EL D +Q+ + IE+L + + + K+K E + +L +++ L+
Sbjct: 169 GKVDPKSDIDVINLELIFCDLDQIGKRIERLKKGKAKDSQSKVKEEAEKSALERIQEALL 228
Query: 656 DEK 664
+ K
Sbjct: 229 EGK 231
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/99 (37%), Positives = 53/99 (53%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
VGIVG PN GKST +V++ +Q N+PF T+ PN V +DY
Sbjct: 381 VGIVGAPNAGKSTLLSVISAAQPTIANYPFTTLLPNLGVV-----SFDY----------- 424
Query: 326 PAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNL 442
+ + V D+ GL+ GA G GLG+ FL H + C A+ ++
Sbjct: 425 DSTMVVADLPGLLEGAHRGFGLGHEFLRHTERCSALVHV 463
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P20964
Spo0B-associated GTP-binding protein {Bacillus subtilis};
contains Pfam profile PF01018: GTP1/OBG family
Length = 1016
Score = 54.0 bits (124), Expect = 1e-07
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
VG+VG+PN GKST L++++ ++ F T+ PN V YD
Sbjct: 829 VGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGNV-----NYDDFS--------- 874
Query: 326 PAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDG--DVNPV 499
+ V DI GL++GA + +GLG+ FL HI+ + A+ + +DG + P
Sbjct: 875 ---MTVADIPGLIKGAHQNRGLGHNFLRHIERTKVL-----AYVVDLASGLDGCEGLTPW 926
Query: 500 RDLETIAEELRLKDEEQLLQHIEKL--DRVVNRGGEKKLK 613
+ L + EL EE L + +++ G E++LK
Sbjct: 927 QQLRDLVMELEF-HEEGLSDRSSLIVANKIDEEGAEERLK 965
>At5g57960.1 68418.m07252 GTP-binding family protein similar to
SP|P25519 GTP-binding protein hflX {Escherichia coli}
Length = 540
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASKV 325
V +VG N GKST N LT + AEN F T+DP RV + + + L + K+
Sbjct: 312 VSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKL 371
Query: 326 PAFL 337
P L
Sbjct: 372 PTTL 375
>At4g39520.1 68417.m05588 GTP-binding protein, putative similar to
SP|Q9Y295 Developmentally regulated GTP-binding protein
1 (DRG 1) {Homo sapiens}; contains Pfam profiles
PF02824: TGS domain, PF01018: GTP1/OBG family
Length = 369
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/97 (28%), Positives = 49/97 (50%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 322
+VG+VG P+VGKST N LT + + ++ F T+ +P + Y
Sbjct: 67 RVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTL------TCIPG-----VITYR----- 110
Query: 323 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAI 433
A + ++D+ G++ GA +G+G G +S + C+ I
Sbjct: 111 -GAKIQLLDLPGIIEGAKDGKGRGRQVISTARTCNCI 146
>At1g72660.1 68414.m08403 developmentally regulated GTP-binding
protein, putative very strong similarity to
developmentally regulated GTP binding protein (DRG1)
[Arabidopsis thaliana] GI:2345150
Length = 399
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/107 (24%), Positives = 51/107 (47%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 322
+V ++G P+VGKST +LT + + A ++ F T+ + D +
Sbjct: 64 RVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTK------------- 110
Query: 323 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDE 463
+ ++D+ G++ GA+EG+G G ++ K+ D + + A E
Sbjct: 111 ----IQLLDLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVLDASKSE 153
>At1g17470.1 68414.m02143 developmentally regulated GTP-binding
protein (DRG1) identical to developmentally regulated
GTP binding protein (DRG1) [Arabidopsis thaliana]
GI:2345150
Length = 399
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/107 (24%), Positives = 51/107 (47%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCEYHKPASK 322
+V ++G P+VGKST +LT + + A ++ F T+ + D +
Sbjct: 64 RVALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGVIHYNDTK------------- 110
Query: 323 VPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDE 463
+ ++D+ G++ GA+EG+G G ++ K+ D + + A E
Sbjct: 111 ----IQLLDLPGIIEGASEGKGRGRQVIAVAKSSDLVLMVLDASKSE 153
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYLCE 301
+ +VG N GKST + LTK+ F T+DP +P + L +
Sbjct: 912 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLLSD 963
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
I G PNVGKS+F N +T++ A + + F T
Sbjct: 202 ICGCPNVGKSSFMNKVTRADVAVQPYAFTT 231
>At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar
to tRNA modification GTPase trmE [strain PCC 7120,
Anabaena sp.] SWISS-PROT:Q8YN91
Length = 560
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 134 TNLKVGIVGVPNVGKSTFFNVLTKSQAA 217
+ L++ IVG PNVGKS+ N +KS+ A
Sbjct: 316 SGLQIAIVGRPNVGKSSLLNAWSKSERA 343
>At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 372
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 122 GRVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAA 220
G + +++ GI+G PNVGKS+ N L K + A
Sbjct: 208 GLLPRSVRAGIIGYPNVGKSSLINRLLKRKICA 240
>At1g80770.1 68414.m09476 expressed protein
Length = 451
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
+VG PNVGKS+ +L+ + N+PF T
Sbjct: 258 LVGAPNVGKSSLVRILSTGKPEICNYPFTT 287
>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
GTP-binding protein SP:Q99ME9 from [Mus musculus]
Length = 671
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 152 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 241
I G PNVGKS+F N +T++ + + F T
Sbjct: 173 ICGYPNVGKSSFMNKVTRADVDVQPYAFTT 202
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 137 NLKVGIVGVPNVGKSTFFNVLTKS 208
++ VGI+G+PNVGKS+ N L ++
Sbjct: 253 SITVGIIGLPNVGKSSLINSLKRA 276
>At3g48520.1 68416.m05296 cytochrome P450 family protein similar to
Cytochrome P450 94A1 (P450-dependent fatty acid
omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
Pfam profile: PF00067 cytochrome P450
Length = 506
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 458 DEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSL-A 634
D D + + VNP+ + A E+ + + + + K RV+N G E+KL+ ++
Sbjct: 195 DPDCLDLTRPVNPLVEAFDTAAEISARRATEPIYAVWKTKRVLNVGSERKLREAIRTVHV 254
Query: 635 KVKTILVDEKKHIXFGDWSAA 697
V I+ +KK + G + A
Sbjct: 255 LVSEIVRAKKKSLEIGTGAEA 275
>At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 386
Score = 31.5 bits (68), Expect = 0.73
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 232
L V +VGVPNVGKS N + Q AA FP
Sbjct: 137 LLVMVVGVPNVGKSALINSI--HQIAAARFP 165
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 137 NLKVGIVGVPNVGKSTFFNVLTKSQAAA 220
+L VGI+G PN GKS+ N + ++ AA
Sbjct: 153 SLNVGIIGPPNAGKSSLTNFMVGTKVAA 180
>At5g40550.1 68418.m04921 expressed protein
Length = 273
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 506 LETIAEELRL-KDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVKTILVDEKK 667
LE E RL KD+E++L I K+ + + E KP SLAK+K + + K+
Sbjct: 10 LENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYIQAKE 64
>At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 616
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVLTKSQ 211
L++ IVG PNVGKST N L + +
Sbjct: 313 LQLAIVGKPNVGKSTLLNALLEEE 336
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 143 KVGIVGVPNVGKSTFFNVLT-KSQAAAENFPFCTID 247
+V IVG PNVGKS FN L +++A + P T D
Sbjct: 160 RVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRD 195
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 140 LKVGIVGVPNVGKSTFFNVL-TKSQAAAENFP 232
+ VG VG PNVGKS+ N L TK+ P
Sbjct: 310 ISVGFVGYPNVGKSSVINTLRTKNVCKVAPIP 341
>At5g50690.1 68418.m06281 short-chain dehydrogenase/reductase (SDR)
family protein similar to steroleosin [Sesamum indicum]
GI:15824408; contains Pfam profile PF00106:
oxidoreductase, short chain dehydrogenase/reductase
family
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 443 CRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGG--EKKLKP 616
CR DV V GDV+ ++D + +E + +LD +VN G E K
Sbjct: 91 CRKLGSPDVAVVRGDVSVIKDCKRFVQE--------TISRFGRLDHLVNNAGIAEAKFFE 142
Query: 617 EYDSLAKVKTIL 652
+Y ++ V I+
Sbjct: 143 DYSEISDVLPIV 154
>At5g50590.1 68418.m06267 short-chain dehydrogenase/reductase (SDR)
family protein similar to sterol-binding dehydrogenase
steroleosin GI:15824408 from [Sesamum indicum]
Length = 299
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 443 CRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNRGG--EKKLKP 616
CR DV V GDV+ ++D + +E + +LD +VN G E K
Sbjct: 91 CRKLGSPDVAVVRGDVSVIKDCKRFVQE--------TISRFGRLDHLVNNAGIAEAKFFE 142
Query: 617 EYDSLAKVKTIL 652
+Y ++ V I+
Sbjct: 143 DYSEISDVLPIV 154
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187; contains
Pfam profile PF02845: CUE domain
Length = 1973
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +2
Query: 299 EYHKPASKVPAFLNVVD--IAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVI 472
E H S + LN++ I L + L N +H + A+ + + ++ ++
Sbjct: 1472 EDHDSLSDISTSLNMLSTRIGSLCWKILDICYLSNDKFNHETSIPAVTKMFPSRVEDPMV 1531
Query: 473 HVDGDVNPVRDLETIAEELRLKDEEQLLQHIEKLDRVVNR 592
D + R++ ++E+ L+ + +LLQ IEK R+++R
Sbjct: 1532 RADILIQTFREISGLSEQ-SLESKNRLLQKIEKNYRIIDR 1570
>At4g37440.1 68417.m05299 expressed protein
Length = 471
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 472 DDVFIIECTTQVKNSITSFDVGQKGVSQSLAFSSAAHE 359
D+V I+EC ++ ++ D G G S S + + HE
Sbjct: 71 DEVDILECNDNIEIQVSGCDDGTDGYSSSFGGTDSEHE 108
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 681 PNXMCFFSSTRIVLTLARESYSGLSFFSP 595
P CF S++R + +YSGLS FSP
Sbjct: 449 PGTPCFKSASRSFVVARSNNYSGLSDFSP 477
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 28.7 bits (61), Expect = 5.1
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +2
Query: 458 DEDVIHVDGDVNPVRD-LET--IAEELRLKDEEQLLQHIEKL-DRVVNR--GGEKKLKPE 619
D+ V+ DGDVN D LE I E+ R + + + + + D N G EKK+ P+
Sbjct: 271 DQSVL-TDGDVNNEIDMLENVEIGEQKRRNEAYEAAKKKKGIYDDKFNDDPGAEKKMLPQ 329
Query: 620 YDSLAKVKTILVDEK 664
YD A + I +D K
Sbjct: 330 YDEAATDEGIFLDAK 344
>At3g47450.2 68416.m05160 expressed protein
Length = 561
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQA 214
V I+G NVGKS F N L K+ A
Sbjct: 282 VYILGAANVGKSAFINALLKTMA 304
>At3g47450.1 68416.m05159 expressed protein
Length = 561
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVLTKSQA 214
V I+G NVGKS F N L K+ A
Sbjct: 282 VYILGAANVGKSAFINALLKTMA 304
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 506 LETIAEELRLKDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSL 631
L + LR K E++ I +LD +++R E L+ Y+SL
Sbjct: 386 LRVVGSSLRGKKEDEWKSVIRRLDTIIDRDIEDVLRVGYESL 427
>At3g57180.1 68416.m06366 expressed protein
Length = 644
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 131 GTNLKVGIVGVPNVGKSTFFNVLTKSQAA 217
G V ++G N GKST N L+K A
Sbjct: 374 GPRGNVWVIGAQNAGKSTLINALSKKDGA 402
>At3g21100.1 68416.m02667 RNA recognition motif (RRM)-containing
protein contains Pfam profile:PF00076 RNA recognition
motif
Length = 602
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +2
Query: 377 EGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNPVRDLETIAEELRLKDEEQLL 556
E G+G+ S K F +F DEDV + G+ PV+D+ ++ R+ L
Sbjct: 305 EFMGMGDKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFL 364
Query: 557 QHIEKLDRVVNRG 595
H E + ++ RG
Sbjct: 365 -HSETVRIILARG 376
>At2g27200.1 68415.m03269 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 537
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVL 199
VG VG PNVGKS+ N L
Sbjct: 307 VGFVGYPNVGKSSTINAL 324
>At1g08410.1 68414.m00930 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 589
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFNVL 199
VG VG PNVGKS+ N L
Sbjct: 311 VGFVGYPNVGKSSTINAL 328
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 146 VGIVGVPNVGKSTFFN 193
V +VG+PNVGKST N
Sbjct: 132 VAVVGMPNVGKSTLSN 147
>At4g38730.1 68417.m05486 expressed protein
Length = 326
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -1
Query: 424 TSFDVGQKGVSQSLAFSSAAHETGYVYHVEESWHFACWFMIFA*VVIPFIRYRYPTLIRV 245
+SF + +KG+ ++ A + A GY Y +E W M F + F+ Y Y + V
Sbjct: 21 SSFILKKKGLKRAAANGTRAGFGGYTYLLEPLWWVGLVTMTFG-EIANFVAYVYAPAVLV 79
>At2g46640.1 68415.m05818 hypothetical protein and genefinder;
expression supported by MPSS
Length = 310
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 536 KDEEQLLQHIEKLDRVVNRGGEKKLKPEYDSLAKVK 643
K+EE L+ I+K+ +++ R +KK+ P+ D+ +K
Sbjct: 202 KEEENDLRPIKKMRQMIKRMLKKKIHPDVDATKALK 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,352,903
Number of Sequences: 28952
Number of extensions: 289698
Number of successful extensions: 1089
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1960634400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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