Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I04
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 562 SSSILPTVTPFSAALGTNSLTNFGIPGLGNPQEILNLPSLSLRRPFISPS 711
           + S+  +++   A  G +SLT+ G   L +P   +  PS+S+  P++  S
Sbjct: 674 AESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQS 723


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 562 SSSILPTVTPFSAALGTNSLTNFGIPGLGNPQEILNLPSLSLRRPFISPS 711
           + S+  +++   A  G +SLT+ G   L +P   +  PS+S+  P++  S
Sbjct: 566 AESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQS 615


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -1

Query: 471 EERNILTSGLYDFVHF--RTGTK*KFHLDFF---DFSTIEHHGLT 352
           ++  I  S ++DFVHF     T   + L+FF    F  I  H +T
Sbjct: 97  DKTGICVSNVFDFVHFYYPVATMSFYVLNFFGSIQFIIISKHWVT 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,290
Number of Sequences: 336
Number of extensions: 4050
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)