Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I04
         (834 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   1e-10
SB_18023| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   1e-07
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)              48   1e-05
SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9)                   29   3.5  
SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)                  28   8.1  

>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 621

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
 Frame = +1

Query: 193 MSVIIRLQNLPWSANALDIRNFFRGLSIPEGGVHIVGGELGDA----FIAFSTDEDARQA 360
           M V+I+++ LP+ A + DI+ FF GLS+ E  +H+   + G A    F  F+ D+DAR+A
Sbjct: 1   MPVVIKMKGLPFEATSRDIQMFFDGLSLREKDIHLAANKDGKASGISFAVFNVDDDARKA 60

Query: 361 MMLDGGKIKEIQVKLLLSSRSEMHKVI 441
           M   G  + +  ++L LSS++EM  V+
Sbjct: 61  MYRTGKYMGKRYIELFLSSQAEMESVL 87



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
 Frame = +1

Query: 181 EETTMSVIIRLQNLPWSANALDIRNFFRGLSIP-------EGGVHIVGGELGDAFIAFST 339
           ++   S I+R+  LP+ ++  D+  FF GL I        + G +  G   G AF+ F +
Sbjct: 327 DQEATSTIVRMFGLPFESSKRDLYKFFNGLKIASIDLLKHKSGKN-QGKNTGVAFVVFKS 385

Query: 340 DEDARQAMMLDGGKIKEIQVKLLLSSRSEMHKVIE 444
           + DA +A+ +D   I    ++L    +  M K +E
Sbjct: 386 NNDASKALKMDRSYIGHRYIELRSVPKDTMVKELE 420



 Score = 34.7 bits (76), Expect = 0.094
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
 Frame = +1

Query: 202 IIRLQNLPWSANALDIRNFFRGLSI-PEG-GVHIV--GGELGDAFIAFSTDEDARQAM-M 366
           ++ ++NLP S  A  I +FF G ++ PE   +H +  G   GDA I F T  DA  A+  
Sbjct: 546 VVGIRNLPSSITADQILDFFYGFNVLPETIKIHYLSPGRSSGDAMITFPTSSDAYAAIDQ 605

Query: 367 LDGGKIKEIQVKLLL 411
           L+   + + +V+L L
Sbjct: 606 LNFRPVGKKKVQLFL 620


>SB_18023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 500

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
 Frame = +1

Query: 187 TTMSVIIRLQNLPWSANALDIRNFFRGLSIP----EGGVHIVGGE----LGDAFIAFSTD 342
           T   VIIR++ LP+S  A D+  FF G  +P    EGG+ +V G      GDAF+ F T+
Sbjct: 320 TNAEVIIRMRGLPFSTKAADVVRFF-GDDVPVYRGEGGILMVRGRNGKATGDAFVLFETE 378

Query: 343 EDARQAMMLDGGKIKEIQVKLLLSSRSEMHKVIET 447
           E  R A+      +    V+L  SS+SE+ +V+ +
Sbjct: 379 EHGRAALKKHREVLGSRYVELFRSSQSEVQQVLSS 413



 Score = 38.7 bits (86), Expect = 0.006
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 202 IIRLQNLPWSANALDIRNFFRGLSIP 279
           ++R + LPW A+  D+ NFFRGL+IP
Sbjct: 174 VLRARGLPWQASDQDVANFFRGLNIP 199


>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 899

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
 Frame = +1

Query: 202 IIRLQNLPWSANALDIRNFFRGLSIPEGGVHIV----GGELGDAFIAFSTDEDARQAMML 369
           +++L+ LP+  +  +I  FF GL I   G+ I     G   G+ F+ F++ E A QAM  
Sbjct: 39  VVKLRGLPYGCSKEEIAQFFTGLEIVPNGITITLDEEGKTTGEGFVEFASPEIAGQAMQK 98

Query: 370 DGGKIKEIQVKLLLSSRSEMHKVIE 444
              KI    +++  SS+S++  V++
Sbjct: 99  HKEKIGHRYIEIFKSSKSDIKYVLK 123


>SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9)
          Length = 910

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 526 QNNLAASSLTVHSSSILPTVTPFSAALGTNSLTNFGIPGLGNPQEILNLPSLSLRRP 696
           QNN  + + + H+S++L         +G N LTN  +P L +P  ++  P   +R P
Sbjct: 594 QNNTGSPNGSPHNSTVLTRDALALPGVGNNGLTNPRLPPLSHP--LVVYPLAQVRTP 648


>SB_6849| Best HMM Match : EGF_2 (HMM E-Value=9.3e-11)
          Length = 439

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +3

Query: 417 PFGNAQSHRDRSSECSSPQSCDCSTYCFRGSPDQRPTKQFSCFL 548
           P+   Q    +  EC  P++CDCS+    G    RP     C L
Sbjct: 143 PYTGTQCDTIKCPECCPPETCDCSS----GHQSCRPDWHHDCCL 182


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,974,109
Number of Sequences: 59808
Number of extensions: 538018
Number of successful extensions: 1341
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)