Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I04
         (834 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   4.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.0  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 441 RDRSSECSSPQSCDCSTYCFRGSPDQRP 524
           R  S EC+  Q  DC T  +R      P
Sbjct: 557 RRASDECNKKQPSDCDTLEYRNGEVTTP 584


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 480 DCSTYCFRGSPDQRPTKQFSCFLFDCSL 563
           DC  YC  G+P +RP     C     S+
Sbjct: 322 DCY-YCISGAPIERPDHAVLCVYMGLSM 348


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 369 RWWKNQRNPSET 404
           RWW   R P++T
Sbjct: 44  RWWSRPREPAQT 55


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 654 SRNPQPTVIEPPPPLHQSEQ 713
           S+NP   +I P   +HQ +Q
Sbjct: 57  SQNPSQMMISPASGIHQMQQ 76


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 615 FAHQFRDSGSRKSSRNPQPTVIEPPP 692
           F+    D  S  SSR+P P+++   P
Sbjct: 28  FSSSIVDRRSPSSSRSPSPSLLTSQP 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,950
Number of Sequences: 438
Number of extensions: 4802
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)