Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I03
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 219 2e-57
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 219 2e-57
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 219 2e-57
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 219 2e-57
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 203 1e-52
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 203 1e-52
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 86 3e-17
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.19
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.44
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.44
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 31 0.77
Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 31 1.0
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 29 3.1
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 29 3.1
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 5.4
Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical pr... 29 5.4
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 5.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 5.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 5.4
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 7.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 9.5
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 9.5
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 219 bits (536), Expect = 2e-57
Identities = 110/148 (74%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +2
Query: 167 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 346
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 347 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPR 523
LVVA+++ G + A Y L KGF HL AGL G GL AGYAIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 524 LFVGMILILIFAEVLGLYGLIVAIYLYT 607
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 383 EPANYPLYKGFI-HLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFA 559
E A Y F ++GA A F+ L A Y +P L + ++ +I A
Sbjct: 6 ETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMA 65
Query: 560 EVLGLYGLIVAIYLYTK*T 616
++G+YGL+VA+ L K T
Sbjct: 66 GIIGIYGLVVAMVLKGKVT 84
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 219 bits (536), Expect = 2e-57
Identities = 110/148 (74%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +2
Query: 167 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 346
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 347 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPR 523
LVVA+++ G + A Y L KGF HL AGL G GL AGYAIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 524 LFVGMILILIFAEVLGLYGLIVAIYLYT 607
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 383 EPANYPLYKGFI-HLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFA 559
E A Y F ++GA A F+ L A Y +P L + ++ +I A
Sbjct: 6 ETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMA 65
Query: 560 EVLGLYGLIVAIYLYTK*T 616
++G+YGL+VA+ L K T
Sbjct: 66 GIIGIYGLVVAMVLKGKVT 84
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 219 bits (536), Expect = 2e-57
Identities = 110/148 (74%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +2
Query: 167 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 346
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 347 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPR 523
LVVA+++ G + A Y L KGF HL AGL G GL AGYAIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 524 LFVGMILILIFAEVLGLYGLIVAIYLYT 607
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 383 EPANYPLYKGFI-HLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFA 559
E A Y F ++GA A F+ L A Y +P L + ++ +I A
Sbjct: 6 ETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMA 65
Query: 560 EVLGLYGLIVAIYLYTK*T 616
++G+YGL+VA+ L K T
Sbjct: 66 GIIGIYGLVVAMVLKGKVT 84
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 219 bits (536), Expect = 2e-57
Identities = 110/148 (74%), Positives = 121/148 (81%), Gaps = 1/148 (0%)
Frame = +2
Query: 167 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 346
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 347 LVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPR 523
LVVA+++ G + A Y L KGF HL AGL G GL AGYAIGIVGDAGVRGTAQQPR
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 524 LFVGMILILIFAEVLGLYGLIVAIYLYT 607
LFVGMILILIF+EVLGLYG+IVA+ L T
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALILGT 160
Score = 35.5 bits (78), Expect = 0.047
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 383 EPANYPLYKGFI-HLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFA 559
E A Y F ++GA A F+ L A Y +P L + ++ +I A
Sbjct: 6 ETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMA 65
Query: 560 EVLGLYGLIVAIYLYTK*T 616
++G+YGL+VA+ L K T
Sbjct: 66 GIIGIYGLVVAMVLKGKVT 84
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 203 bits (496), Expect = 1e-52
Identities = 97/147 (65%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = +2
Query: 164 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 343
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 344 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQP 520
GLVVAV+++G ++ ANY + F GL G GL AGYAIGI GDAGVR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 521 RLFVGMILILIFAEVLGLYGLIVAIYL 601
R+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 203 bits (496), Expect = 1e-52
Identities = 97/147 (65%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = +2
Query: 164 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 343
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 344 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRGTAQQP 520
GLVVAV+++G ++ ANY + F GL G GL AGYAIGI GDAGVR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 521 RLFVGMILILIFAEVLGLYGLIVAIYL 601
R+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +2
Query: 188 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 367
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 368 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRG 505
G L E + P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 506 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 595
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 419 HLGAGLAVGFS----GLAAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 586
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 587 VAIYLYTK 610
+A K
Sbjct: 109 MAFVFVGK 116
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 85.8 bits (203), Expect = 3e-17
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Frame = +2
Query: 188 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 367
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 368 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLAAGYAIGIVGDAGVRG 505
G L E + P L G++ G GL VG S L G A+GIVG
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 506 TAQQPRLFVGMILILIFAEVLGLYGLIVAI 595
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
Score = 41.1 bits (92), Expect = 0.001
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Frame = +2
Query: 419 HLGAGLAVGFS----GLAAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 586
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 587 VAIYLYTK 610
+A K
Sbjct: 109 MAFVFVGK 116
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 301 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 384
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 400 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 302
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 400 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 302
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 31.5 bits (68), Expect = 0.77
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +3
Query: 78 SECVQIVITVFGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPM 236
SE V ++ F TC + + T + +QS ++ W R +L +PW L M
Sbjct: 283 SEAVPLLGVFFHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRM 342
Query: 237 ELPSQE 254
++P +E
Sbjct: 343 KMPDRE 348
>Z68314-1|CAA92658.1| 102|Caenorhabditis elegans Hypothetical
protein F07H5.6 protein.
Length = 102
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 347 LVVAVLIAGALQEPANYPLYKGF-IHLGAGLAVGFSGLAAGYAIGIVGDAGVRG 505
LV +LI + + + + G+ + LG G GF G + GY +G G G G
Sbjct: 6 LVAILLIIPTIVQSCGFGGFGGYGLGLGLGCGGGFGGFSGGYGLGYGGGFGGYG 59
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 601 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGVTGSQTRE 446
++DG++ K + K KNH+D P LL ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 601 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAY 473
++DG++ K + K KNH+D P LL ST+ + ++ D +
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKF 602
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 601 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAY 473
++DG++ K + K KNH+D P LL ST+ + ++ D +
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKF 602
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 331 YCHLRSGRGCPDCWCPPGASQ 393
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z73978-1|CAA98294.1| 236|Caenorhabditis elegans Hypothetical
protein ZC302.3 protein.
Length = 236
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -3
Query: 580 SVKTQYFSENKNKNHSDE*PRLLSSTTHACISHDAYG--VTGSQTRESYSQTSTQVDEPF 407
S++T+Y + N+N S +L+ A + +AY + + R+ + + ++D F
Sbjct: 154 SLQTEYLNYKANRNDSRSPSQLVKKIKDATMKAEAYEFFMDDKRVRKVIGELN-EIDSKF 212
Query: 406 VKGVVGWLLE 377
+ + WLL+
Sbjct: 213 KENIGAWLLQ 222
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 313 CRHGGYYCHLRSGRGCPDCWCPPGASQ 393
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 331 YCHLRSGRGCPDCWCPPGASQ 393
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 331 YCHLRSGRGCPDCWCPPGASQ 393
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -3
Query: 460 SQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDRLHDQLR 284
S++R+ ++ T+ D+ P +K V E S+ DS + D R DDR D D R
Sbjct: 24 SRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGRRDDRRDNRRDDRR 81
Query: 283 PH 278
H
Sbjct: 82 DH 83
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 281 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 406
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 334 CHLRSGR-GCPDCWCPPGASQLPP 402
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 313 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 438
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 313 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 438
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,012,385
Number of Sequences: 27780
Number of extensions: 420004
Number of successful extensions: 1276
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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