Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I02
         (812 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PDN0 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=...    35   2.1  
UniRef50_A2DNI7 Cluster: Putative uncharacterized protein; n=1; ...    35   2.8  
UniRef50_A0CAI9 Cluster: Chromosome undetermined scaffold_161, w...    34   4.9  
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ...    33   6.5  
UniRef50_Q9VJB6 Cluster: Putative neural-cadherin 2 precursor; n...    33   6.5  
UniRef50_Q4GZD7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q7PDN0 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=7;
            Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
            PFEMP3 - Plasmodium yoelii yoelii
          Length = 1025

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = -3

Query: 360  DLP*NKRLINLEFLLSLSVYQYHLFSYLCIYCILSEARCVTSYQVHDYMTSFFF 199
            ++P NK+    E +  + +Y+Y  F  LC+Y  LS+ RC T +    Y  SFFF
Sbjct: 972  NVPINKK----ELIAEVHIYRYIFF--LCVYTFLSQKRCFTQF----YFFSFFF 1015


>UniRef50_A2DNI7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 654

 Score = 34.7 bits (76), Expect = 2.8
 Identities = 19/70 (27%), Positives = 36/70 (51%)
 Frame = -3

Query: 348 NKRLINLEFLLSLSVYQYHLFSYLCIYCILSEARCVTSYQVHDYMTSFFFLXRRKVHIFG 169
           N +++N E +LS++ Y+  +  +L         +  T Y V D+ T F ++ + KVH+  
Sbjct: 521 NLQVVNFEGILSVNEYRSIVEDFLFELKYTGSEK--TDYFVDDFFTYFIYINKLKVHVPD 578

Query: 168 CYYVCTHCVI 139
            Y + + C I
Sbjct: 579 TYLIDSFCGI 588


>UniRef50_A0CAI9 Cluster: Chromosome undetermined scaffold_161,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_161,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 3076

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 276 CIYCILSEARCVTSYQVHDYMTSFFFLXRRKVHIFGCYYVCTHCV 142
           C  CI  + R +TS Q  D M ++  L   +   F CYY C  C+
Sbjct: 519 CTLCIAGQNRMLTSKQSCDCMNTYGDLNGVQDVCFQCYYTCGGCI 563


>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
           n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
           UTERU3011092 - Homo sapiens (Human)
          Length = 291

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 294 HLFSYLCIYCILSEARCVTSYQVHDYMTSFFFLXRRK-VHIFGCYYVCTH 148
           H+ +Y+CI+       CV    +H Y+ S+  +     VH++ C ++C H
Sbjct: 130 HMHTYMCIHMYTCIHICVFMCTMHAYVYSYVHMHAYVCVHMYTCVHMCIH 179


>UniRef50_Q9VJB6 Cluster: Putative neural-cadherin 2 precursor; n=5;
            Diptera|Rep: Putative neural-cadherin 2 precursor -
            Drosophila melanogaster (Fruit fly)
          Length = 2215

 Score = 33.5 bits (73), Expect = 6.5
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -3

Query: 282  YLCIYCILSEARCVTSYQVHDYMTSF 205
            ++C+  ILS+ +CV SY +HD + SF
Sbjct: 1750 FVCLIIILSQCKCVFSYAMHDNLFSF 1775


>UniRef50_Q4GZD7 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 132

 Score = 33.1 bits (72), Expect = 8.6
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -3

Query: 294 HLFSYLCIYCILSEARCVTSYQVHDYMTSFFFLXRRKVHIFG-CYYVCTHCVIL 136
           HLF  LC+YC + E R   S+ ++ YM +  F    KV +F   +Y  +H +++
Sbjct: 42  HLFICLCLYCGM-EQRVAFSFFIYIYMKNKPFPLTGKVTLFAHLFYFLSHVLLM 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,838,409
Number of Sequences: 1657284
Number of extensions: 12522277
Number of successful extensions: 35970
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35407
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)