Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I02
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.8  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   8.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 336 INLEFLLSLSVYQYHLFSYLCIYCILS 256
           ++L FLL L  +  HL    CIY   S
Sbjct: 191 MHLLFLLCLDYFTLHLLFLPCIYYFYS 217



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 336 INLEFLLSLSVYQYHLFSYLCIY 268
           ++L FLL +  +   LF  LCIY
Sbjct: 125 VHLLFLLCIYYFVVPLFFLLCIY 147



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = -3

Query: 336 INLEFLLSLSVYQYHLFSYLCI---YCILSEARCV 241
           ++L F  +  ++  HL   LCI   YC L    C+
Sbjct: 264 MHLLFCCAFIIFTMHLLFLLCIYYFYCALIILLCI 298


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 213 SCNHVLDNLLHISPHSRY 266
           S N +L+NLL   P+S Y
Sbjct: 407 SDNRILNNLLDKKPYSTY 424


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 213 SCNHVLDNLLHISPHSRY 266
           S N +L+NLL   P+S Y
Sbjct: 299 SDNRILNNLLDKKPYSTY 316


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 333 NLEFLLSLSVYQYHLFSYLCIY 268
           N+EF  +L  Y+  LF Y   Y
Sbjct: 432 NIEFAGALVTYELTLFQYHAFY 453


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 619 HIMSGSPIWKYSTKGCS 669
           H+ S S +++YS + CS
Sbjct: 277 HMKSHSNVYRYSCRDCS 293


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 619 HIMSGSPIWKYSTKGCS 669
           H+ S S +++YS + CS
Sbjct: 35  HMKSHSNVYRYSCRDCS 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,906
Number of Sequences: 336
Number of extensions: 3712
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)