Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_I02
         (812 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    33   0.93 

>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 294 HLFSYLCIYCILSEARCVTSYQVHDYMTSFFFLXRRK-VHIFGCYYVCTH 148
           H+ +Y+CI+       CV    +H Y+ S+  +     VH++ C ++C H
Sbjct: 130 HMHTYMCIHMYTCIHICVFMCTMHAYVYSYVHMHAYVCVHMYTCVHMCIH 179



 Score = 30.7 bits (66), Expect = 6.5
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -3

Query: 336 INLEFLLSLSVYQY-HLFSYLCIYCILSEARCVTSYQVHDYMTSFFFLXRRKVHIFGCYY 160
           I++   + + VY Y H+++Y+ I+  +    CV SY +H Y T  +      VHI+   +
Sbjct: 210 IHIYICIHVCVYSYIHMYTYVYIHVYIGIHMCVYSY-MHRY-TYVYIHICICVHIYTHIH 267

Query: 159 VCTH 148
           + TH
Sbjct: 268 IHTH 271


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,915,462
Number of Sequences: 237096
Number of extensions: 1898824
Number of successful extensions: 3145
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3144
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)