Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_I01
(838 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 182 3e-46
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 181 5e-46
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 177 6e-45
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 177 7e-45
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 165 4e-41
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 164 7e-41
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 156 1e-38
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 155 3e-38
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 153 2e-37
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 153 2e-37
At5g19460.1 68418.m02319 MutT/nudix family protein similar to SP... 32 0.41
At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger) fa... 30 1.7
At1g78420.1 68414.m09138 expressed protein 29 2.9
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 29 3.8
At2g29980.2 68415.m03647 omega-3 fatty acid desaturase, endoplas... 29 5.1
At2g29980.1 68415.m03646 omega-3 fatty acid desaturase, endoplas... 29 5.1
At2g43970.2 68415.m05468 La domain-containing protein contains P... 28 6.7
At2g43970.1 68415.m05467 La domain-containing protein contains P... 28 6.7
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 28 6.7
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 6.7
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 182 bits (442), Expect = 3e-46
Identities = 91/152 (59%), Positives = 106/152 (69%)
Frame = +2
Query: 164 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 343
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LLF++
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVESNRRALRELLFTTPG 64
Query: 344 VLPENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 523
LP +SGVILF ETLYQK+ DGTP V +L+ G++PGIKVDKG V L G+ E TTQGL
Sbjct: 65 ALP-CLSGVILFEETLYQKSSDGTPFVDMLKSAGVLPGIKVDKGTVELAGTNGETTTQGL 123
Query: 524 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPS 619
D L RC +Y + G FAKWR VLKIG N PS
Sbjct: 124 DGLGDRCKKYYEAGARFAKWRAVLKIGVNEPS 155
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +3
Query: 597 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
++ P AI ENA LARYA ICQ +VPIVEPE+L DG HD+ +
Sbjct: 148 KIGVNEPSQLAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIQK 196
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 181 bits (441), Expect = 5e-46
Identities = 91/147 (61%), Positives = 102/147 (69%)
Frame = +2
Query: 179 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPEN 358
+EL K A+ I P KGILAADESTGT+GKR I VEN E NR+ R+LLF+S P
Sbjct: 10 DELIKTAKYIATPGKGILAADESTGTIGKRFASINVENIESNRQALRELLFTSPGTFP-C 68
Query: 359 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 538
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKGVV L G+ E TTQGLD L
Sbjct: 69 LSGVILFEETLYQKTTDGKPFVELLMENGVIPGIKVDKGVVDLAGTNGETTTQGLDSLGA 128
Query: 539 RCAQYKKDGCHFAKWRCVLKIGRNTPS 619
RC +Y K G FAKWR VLKIG PS
Sbjct: 129 RCQEYYKAGARFAKWRAVLKIGATEPS 155
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +3
Query: 597 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
++ AT P +IQENA LARYA ICQ +VPIVEPEVL DG HD+ +
Sbjct: 148 KIGATEPSELSIQENAKGLARYAIICQENGLVPIVEPEVLTDGSHDIKK 196
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 177 bits (432), Expect = 6e-45
Identities = 89/151 (58%), Positives = 104/151 (68%)
Frame = +2
Query: 176 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPE 355
++EL K A+ I P +GILAADEST T+GKR I VENTE NR+ YR+LLF+S P
Sbjct: 9 EDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYP- 67
Query: 356 NISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLA 535
+SGVILF ETLYQK DG P V LL + G+IPGIKVDKG+V L G+ E TTQGLD L
Sbjct: 68 CLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLG 127
Query: 536 QRCAQYKKDGCHFAKWRCVLKIGRNTPSLPS 628
RC QY + G FAKWR KIG PS+ S
Sbjct: 128 ARCQQYYEAGARFAKWRAFFKIGATEPSVLS 158
Score = 62.1 bits (144), Expect = 4e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +3
Query: 597 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
++ AT P +IQE+A VLARYA ICQ +VPIVEPEVL G HD+ +
Sbjct: 148 KIGATEPSVLSIQEDARVLARYAIICQENGLVPIVEPEVLTGGSHDIKK 196
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 177 bits (431), Expect = 7e-45
Identities = 89/152 (58%), Positives = 106/152 (69%)
Frame = +2
Query: 164 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 343
T + +EL A I P KGILAADESTGT+GKRL I VEN E NRR R+LLF++
Sbjct: 5 TSKFADELIANAAYIGTPGKGILAADESTGTIGKRLASINVENVETNRRNLRELLFTAPG 64
Query: 344 VLPENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 523
LP +SGVILF ETLYQK+ DG V +L++ G++PGIKVDKG V L G++ E TTQGL
Sbjct: 65 ALP-CLSGVILFEETLYQKSSDGKLFVDILKEGGVLPGIKVDKGTVELAGTDGETTTQGL 123
Query: 524 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPS 619
D L RC +Y + G FAKWR VLKIG N PS
Sbjct: 124 DGLGDRCKKYYEAGARFAKWRAVLKIGENEPS 155
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +3
Query: 597 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
++ P +I ENA LARYA ICQ +VPIVEPE+L DG HD+ +
Sbjct: 148 KIGENEPSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIQK 196
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 165 bits (400), Expect = 4e-41
Identities = 83/147 (56%), Positives = 99/147 (67%)
Frame = +2
Query: 179 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPEN 358
+EL A I P KGILAADESTGT+GKR I VEN E NRR R+LLF++ L +
Sbjct: 10 DELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELLFTTPGAL-QY 68
Query: 359 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 538
ISG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L
Sbjct: 69 ISGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGD 128
Query: 539 RCAQYKKDGCHFAKWRCVLKIGRNTPS 619
RC +Y + G FAKWR VLKIG N PS
Sbjct: 129 RCKKYYEAGARFAKWRAVLKIGNNEPS 155
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 597 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
++ P AI ENA LARYA ICQ +VPIVEPE+L DG HD+++
Sbjct: 148 KIGNNEPSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIEK 196
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 164 bits (398), Expect = 7e-41
Identities = 83/146 (56%), Positives = 98/146 (67%)
Frame = +2
Query: 182 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPENI 361
EL A I P KGILAADESTGT+GKR I VEN E NRR R+LLF++ L + I
Sbjct: 45 ELIANAAYIGTPGKGILAADESTGTIGKRFVSINVENVESNRRALRELLFTTPGAL-QYI 103
Query: 362 SGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQR 541
SG+ILF ETLYQK G V ++++ G++PGIKVDKG V L G+ E TT GLD L R
Sbjct: 104 SGIILFEETLYQKTASGKLFVDVMKEAGVLPGIKVDKGTVELAGTNGETTTTGLDGLGDR 163
Query: 542 CAQYKKDGCHFAKWRCVLKIGRNTPS 619
C +Y + G FAKWR VLKIG N PS
Sbjct: 164 CKKYYEAGARFAKWRAVLKIGNNEPS 189
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +3
Query: 597 RLAATPPRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
++ P AI ENA LARYA ICQ +VPIVEPE+L DG HD+++
Sbjct: 182 KIGNNEPSELAIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDIEK 230
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 156 bits (379), Expect = 1e-38
Identities = 82/147 (55%), Positives = 98/147 (66%)
Frame = +2
Query: 179 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPEN 358
+EL K A+ I +P GI+A DES T GKRL IG+ENTE NR+ YR LL S+ L +
Sbjct: 54 DELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPG-LGQY 112
Query: 359 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 538
ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS DE QGLD LA
Sbjct: 113 ISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLAS 172
Query: 539 RCAQYKKDGCHFAKWRCVLKIGRNTPS 619
R A Y + G FAKWR V+ I N PS
Sbjct: 173 RTAAYYQQGARFAKWRTVVSI-PNGPS 198
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +3
Query: 615 PRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
P A++E A LARYA+I Q +VPIVEPE++ DGEH +DR
Sbjct: 197 PSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDR 239
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 155 bits (376), Expect = 3e-38
Identities = 77/141 (54%), Positives = 95/141 (67%)
Frame = +2
Query: 179 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPEN 358
+EL K A++I +P +GILA DES T GKRL IG++NTE+NR+ YRQLL ++ L +
Sbjct: 46 DELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPG-LGDY 104
Query: 359 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 538
ISG ILF ETLYQ DG V L I+PGIKVDKG+ PL GS +E QGLD LA
Sbjct: 105 ISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLAS 164
Query: 539 RCAQYKKDGCHFAKWRCVLKI 601
R A+Y K G FAKWR V+ +
Sbjct: 165 RSAEYYKQGARFAKWRTVVSV 185
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +3
Query: 615 PRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
P A++E A LARYA+I Q +VPIVEPE+L DG+H ++R
Sbjct: 189 PSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIER 231
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 153 bits (370), Expect = 2e-37
Identities = 78/147 (53%), Positives = 99/147 (67%)
Frame = +2
Query: 179 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPEN 358
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL S+ L +
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPG-LGQY 111
Query: 359 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 538
+SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD L+
Sbjct: 112 VSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLDGLSS 171
Query: 539 RCAQYKKDGCHFAKWRCVLKIGRNTPS 619
R A Y + G FAKWR V+ I N PS
Sbjct: 172 RTAAYYQQGARFAKWRTVVSI-PNGPS 197
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3
Query: 615 PRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
P A++E A LARYA+I Q +VPIVEPE+L DGEHD+DR
Sbjct: 196 PSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDR 238
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 153 bits (370), Expect = 2e-37
Identities = 78/147 (53%), Positives = 99/147 (67%)
Frame = +2
Query: 179 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLPEN 358
+EL K A+ I +P +GILA DES T GKRL IG+ENTE NR+ +R LL S+ L +
Sbjct: 53 DELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPG-LGQY 111
Query: 359 ISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 538
+SG ILF ETLYQ +G +V +L ++ I+PGIKVDKG+VPL GS +E QGLD L+
Sbjct: 112 VSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWCQGLDGLSS 171
Query: 539 RCAQYKKDGCHFAKWRCVLKIGRNTPS 619
R A Y + G FAKWR V+ I N PS
Sbjct: 172 RTAAYYQQGARFAKWRTVVSI-PNGPS 197
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3
Query: 615 PRYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDR 743
P A++E A LARYA+I Q +VPIVEPE+L DGEHD+DR
Sbjct: 196 PSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDR 238
>At5g19460.1 68418.m02319 MutT/nudix family protein similar to
SP|P41888 Thiamine pyrophosphokinase (EC 2.7.6.2) (TPK)
(Thiamine kinase) {Schizosaccharomyces pombe}; contains
Pfam profile PF00293: NUDIX domain
Length = 374
Score = 32.3 bits (70), Expect = 0.41
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Frame = +2
Query: 293 TEENRRRYRQLLFSSDAVLPENISGVILFHETLYQKADDGT----PLVSLLEKKGIIPGI 460
TE R + FS + P+ + G + + L QK +D T ++ +L KGIIPGI
Sbjct: 116 TEYLREFHDIFTFSQNGSCPDRVDGYVTLNLML-QKPEDRTRAVADVIKILGDKGIIPGI 174
Query: 461 KVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKW-----RCVLKIGRNTPSLP 625
+ + + P+ S + L+ A K G H + + +L IG+ + S
Sbjct: 175 RNE--LYPVKPSFNAPVFFSLERAAAPYFGIKGYGVHMNGYVERDGQKLLWIGKRSLSKS 232
Query: 626 SYPG 637
+YPG
Sbjct: 233 TYPG 236
>At1g49850.1 68414.m05589 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 250
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = +1
Query: 445 HHPRHQGRQGC----RPAVRIGRRMHHPGSGRPRPALRPVQ 555
HH + GC RP R+ R HHP R RP +R VQ
Sbjct: 44 HHNQRHDSDGCDPLRRPTPRLRRFFHHPIQERSRP-IRDVQ 83
>At1g78420.1 68414.m09138 expressed protein
Length = 401
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 610 HPLVTKLSRKTPMFSPATPPSVRANASCQLSS 705
H V+ R TP+ PATP S SC +S+
Sbjct: 250 HSYVSSPPRVTPIVEPATPSSSSGGLSCAISA 281
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 125 KK*PTMSTYFQYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEEN 304
KK P+ T + +LQEELKK I A++ K+LQ++ EE+
Sbjct: 90 KKRPSRITELELLVSQLQEELKKAKDQISVSETSKKQAEQEAEESRKQLQEVS-SKLEES 148
Query: 305 RRRY 316
+ ++
Sbjct: 149 QNQF 152
>At2g29980.2 68415.m03647 omega-3 fatty acid desaturase, endoplasmic
reticulum (FAD3) identical to SP:48623
Length = 288
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 256 NGQAFAGHRRGEHRGEPSSLSPTAIQL*RCAPREHLW 366
NG AG R+ E R +PS+ P I R A +H W
Sbjct: 12 NGDPGAGDRKKEERFDPSAQPPFKIGDIRAAIPKHCW 48
>At2g29980.1 68415.m03646 omega-3 fatty acid desaturase, endoplasmic
reticulum (FAD3) identical to SP:48623
Length = 386
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 256 NGQAFAGHRRGEHRGEPSSLSPTAIQL*RCAPREHLW 366
NG AG R+ E R +PS+ P I R A +H W
Sbjct: 12 NGDPGAGDRKKEERFDPSAQPPFKIGDIRAAIPKHCW 48
>At2g43970.2 68415.m05468 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 529
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 433 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 537
G HH H + G +P+ M PG G+ +P
Sbjct: 470 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 504
>At2g43970.1 68415.m05467 La domain-containing protein contains Pfam
profile PF05383: La domain
Length = 545
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 433 GEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 537
G HH H + G +P+ M PG G+ +P
Sbjct: 486 GRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQP 520
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Frame = +1
Query: 571 LRQVALRAEDWPQHPLVTKLSRKTPMFSPATPPSVRANASCQLSSPKFY------LMAST 732
LR V + AE P H + + P P+ PP V ++ +P Y L +
Sbjct: 637 LRAVIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLIS 696
Query: 733 TWTAPKR 753
TWT KR
Sbjct: 697 TWTGKKR 703
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 451 PRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLR 576
P + GCRP +RI R + SG + + + + PLR
Sbjct: 192 PNFDSQHGCRPIIRIFGRNYSSKSGLSTEMVYSMSDKKKPLR 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,220,868
Number of Sequences: 28952
Number of extensions: 448732
Number of successful extensions: 1345
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1931371200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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