Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H24
         (871 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 520 NGTRGRMGDSHSCH 479
           NGT   +G+SH CH
Sbjct: 158 NGTCEDIGNSHRCH 171


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
 Frame = +3

Query: 516 PFTPTVLI---VNGNAKTKCXXXXXXXRISRGNLWKTGPEKTCR*S*VEADRF 665
           PFT  + +    NGN K  C          RGN W    +K      +E D+F
Sbjct: 481 PFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMF---IELDKF 530


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 4   SRCHVPAHFTCVLCYLR 54
           SR H+PAH     C+++
Sbjct: 337 SRRHLPAHLVAGTCFVQ 353


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 717 CIQKRTGXDLIXXIPXXTNL 776
           CI+ R G +++   P  TN+
Sbjct: 440 CIKNREGFEMVIAEPEYTNI 459


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,424
Number of Sequences: 336
Number of extensions: 4524
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)