Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H24
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349...    32   0.52 
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098...    32   0.52 
04_04_1577 + 34554819-34554995,34555672-34555754,34555906-345562...    29   3.7  
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029...    29   4.8  
02_04_0349 + 22222091-22222639,22222718-22223695                       29   4.8  
08_01_0946 + 9393206-9393547,9394495-9395078,9395410-9395890           29   6.4  
02_02_0037 - 6260171-6260382,6260657-6260723                           28   8.5  

>05_05_0343 -
           24234026-24234235,24234254-24234502,24234642-24234959,
           24235111-24235371,24235457-24235534,24235834-24236262
          Length = 514

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +2

Query: 536 DRKWECEDKMPASAAACKDIARQLVEDWPGKDLQVILGGGRQVLVSNSTGTKE 694
           D +W C++K+   A        + + D  GK +  I+GGG  V      G  +
Sbjct: 427 DYRWNCQNKLNGIAKTSLTAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVAD 479


>01_06_0765 -
           31808775-31809443,31809547-31809703,31809777-31809894,
           31810170-31810308
          Length = 360

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +2

Query: 275 LKTYSANKMVPDSSCSATALFCGVKANQETIGVDASVKHKDCSASL--RPEARLKSLASI 448
           L+     KM+ + S  ATA+  G K N E   + A +  KD   ++     A LK     
Sbjct: 278 LEEEETKKMIEEESIDATAIDSGEKENPEVAELKAKLMAKDMEVAILTADNAELKKQVGE 337

Query: 449 ALKAGKSA 472
           A +A K A
Sbjct: 338 AAEAAKKA 345


>04_04_1577 +
           34554819-34554995,34555672-34555754,34555906-34556229,
           34556347-34556602,34556951-34557031,34557106-34557213,
           34557300-34557329,34557475-34557612,34557737-34557774,
           34557858-34557957,34558194-34558268
          Length = 469

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = +2

Query: 518 IYAHSADRKWECEDKMPASAAACKDIARQLVEDWPGKDLQVILGGGRQVLVSNSTGTKED 697
           + A   + +W  +   P       D+++Q +ED     L + L G   +++SN+T ++  
Sbjct: 308 VQAARDEMQWAEDGPPPLLVKIAPDLSKQDLEDIAAVALALRLDG---LIISNTTISRPS 364

Query: 698 PLDTWXLHPEKDG 736
           P DT  L  E  G
Sbjct: 365 PADTHPLAQEAGG 377


>05_03_0366 -
           13102147-13102281,13102560-13102739,13102791-13102992,
           13104385-13104575
          Length = 235

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -1

Query: 607 KLPRDILAS-SSASRHFVFAFPFTISTVGVNGTRGR--MGDSHSCHKTGT 467
           +LPR  L S SS SR        + S V   G+ G   +G SH  HK+GT
Sbjct: 21  RLPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGGSHGLHKSGT 70


>02_04_0349 + 22222091-22222639,22222718-22223695
          Length = 508

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -2

Query: 699 GSSLVPVLLDTRTCLPPPRITCKSFPGQ 616
           GS+  P   D    LPPP   C  FP Q
Sbjct: 2   GSASTPAASDGEIKLPPPHAVCMPFPAQ 29


>08_01_0946 + 9393206-9393547,9394495-9395078,9395410-9395890
          Length = 468

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = -2

Query: 303 TILLAEYVFNSPTCGNFS*TNL*LSPPLYILVAVTVLGPMPSPTKRITFFATPR 142
           +++LA Y+  +   GN    +   S  L+I+  + +L P+  P K   F ++PR
Sbjct: 126 SVVLAVYLVTTTVLGNAIKLSDATSYTLFIVTVLLLLAPLAIPVKMTLFRSSPR 179


>02_02_0037 - 6260171-6260382,6260657-6260723
          Length = 92

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +1

Query: 508 PGSHLRPQC*S*MGMRRQNAC*RCCLQGYREATCGRLARK 627
           P SH +  C     +R QN    C L+GY +  C  L R+
Sbjct: 39  PSSHFKGLC-----LRSQNCDNECMLEGYMDGKCKYLTRR 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,774,362
Number of Sequences: 37544
Number of extensions: 550256
Number of successful extensions: 1505
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)