BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H24
(871 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline... 173 8e-45
AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein p... 28 0.32
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 26 1.3
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 25 2.3
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 25 3.0
>CR954256-10|CAJ14151.1| 548|Anopheles gambiae putative alkaline
phosphatase protein.
Length = 548
Score = 173 bits (420), Expect = 8e-45
Identities = 90/177 (50%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
Frame = +2
Query: 140 NLGVAKNVILFVGDGMGPNTVTATRIYKGGESHRLVYEKFPHVGLLKTYSANKMVPDSSC 319
N VAKNVI+F+GDG+ T+ ATR+Y G ES L +E+FP+VGL KTY AN V DS+C
Sbjct: 96 NRKVAKNVIMFLGDGLSIPTLAATRVYLGDESTELSFERFPYVGLSKTYCANVQVADSAC 155
Query: 320 SATALFCGVKANQETIGVDASVKHKDCSASLRPEARLKSLASIALKAGKSAGFVTTMRVT 499
+ATA GVKAN TIG+ A+ DC A + S+A A AG S GFVTT VT
Sbjct: 156 TATAYLAGVKANYGTIGLTAAAALGDCQAQNDTSNHVHSIAKWAQDAGLSTGFVTTTEVT 215
Query: 500 HATPGPIYAHSADRKWECE---DKMPASAAACKDIARQLVEDWPGKDLQVILGGGRQ 661
+A+P IYAH+A+R WE +K A C+DIA QL+ GK +QVI+GGGR+
Sbjct: 216 NASPAGIYAHTANRNWEYNGAIEKDGFDPAVCQDIASQLIHGEVGKHMQVIMGGGRR 272
>AB090822-1|BAC57919.1| 468|Anopheles gambiae gag-like protein
protein.
Length = 468
Score = 28.3 bits (60), Expect = 0.32
Identities = 16/60 (26%), Positives = 22/60 (36%)
Frame = +1
Query: 502 CDPGSHLRPQC*S*MGMRRQNAC*RCCLQGYREATCGRLARKRLAGNPRWRQTGSCIQQH 681
C H+ C S + N C RC G+ ATC R P + C+Q +
Sbjct: 409 CLERGHVSRDCHS--PVNHSNVCIRCGTSGHLAATCEAEVRCASCAGPHRMGSAQCVQSN 466
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 26.2 bits (55), Expect = 1.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 556 RQNAC*RCCLQGYREATC 609
RQN C RC +G++ TC
Sbjct: 570 RQNVCIRCGQEGHKAGTC 587
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 25.4 bits (53), Expect = 2.3
Identities = 14/56 (25%), Positives = 20/56 (35%)
Frame = +1
Query: 502 CDPGSHLRPQC*S*MGMRRQNAC*RCCLQGYREATCGRLARKRLAGNPRWRQTGSC 669
C H+ +C G R + C RC ++ C + L G P SC
Sbjct: 239 CLERGHMVREC---QGTNRSSLCIRCGAANHKAVNCTNDVKCLLCGGPHRIAAASC 291
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 25.0 bits (52), Expect = 3.0
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = +1
Query: 502 CDPGSHLRPQC*S*MGMRRQNAC*RCCLQGYREATCGRLARKRLAGNPRWRQTGSCIQ 675
C H+ +C S + RQ AC RC +G+ C + + P C++
Sbjct: 367 CLERGHIARECRS--PVDRQKACIRCGAEGHLAKDCNAEVKCAVCSGPHRVGHSDCVR 422
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 931,995
Number of Sequences: 2352
Number of extensions: 20726
Number of successful extensions: 39
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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