Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H23
(814 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 352 2e-97
SB_19388| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 8e-09
SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) 57 1e-08
SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10) 52 6e-07
SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.022
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 31 0.84
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 31 0.84
SB_34038| Best HMM Match : Ubie_methyltran (HMM E-Value=0.0014) 29 3.4
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_36714| Best HMM Match : RBM1CTR (HMM E-Value=0.72) 29 5.9
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 352 bits (865), Expect = 2e-97
Identities = 172/239 (71%), Positives = 192/239 (80%)
Frame = +1
Query: 4 LDIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAIS 183
L+IRNMSVIAHVDHGKSTLTDSLVSKAGIIA A+AGETRFTDTRKDEQDRCITIKSTAIS
Sbjct: 16 LNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAAAKAGETRFTDTRKDEQDRCITIKSTAIS 75
Query: 184 MFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 363
+++EL E D +IT P ++ E+GFLINLIDSPGHVDFSSEVTAALRVTDGAL
Sbjct: 76 LYYELPESDFEYITQP--KDPKERGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCV 133
Query: 364 XXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY 543
QTETVLRQAIAERIKP+LFMNKMDR YQTF RIVE++NVIIATY
Sbjct: 134 SGVCVQTETVLRQAIAERIKPVLFMNKMDRALLELQLDQEDLYQTFARIVESINVIIATY 193
Query: 544 NDDGGPMGEVRVDPSXGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENF 720
+D+ GPMG ++V P G+V FGSGLHGWAFTLKQ SE+Y+ KFKI KLM RLWG+ F
Sbjct: 194 SDEDGPMGNIQVGPEKGTVAFGSGLHGWAFTLKQISEIYSAKFKIPPAKLMKRLWGDQF 252
>SB_19388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 75.4 bits (177), Expect = 5e-14
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +1
Query: 583 PSXGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENF 720
P G+V FGSGLHGWAFTLKQ SE+Y+ KFKI KLM RLWG+ F
Sbjct: 34 PEKGTVAFGSGLHGWAFTLKQISEIYSAKFKIPPAKLMKRLWGDQF 79
>SB_40813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 61.3 bits (142), Expect = 9e-10
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Frame = +1
Query: 382 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGGP 561
TE +L+ A+ E + + +NK+DR Y + +++ VN +++ +++
Sbjct: 170 TERLLKHAVQENLAITICINKIDRLILELKLPPTDAYYKLKHVIDEVNGLLSVFSEGA-- 227
Query: 562 MGEVRVDPSXGSVGFGSGLHGWAFTLKQFSEMYADKF--KIDLVKLMNRLWGENFSXXKR 735
++ + P G+V F S + + FTL F+++Y D F ID RLWG+ + K
Sbjct: 228 -DDLVISPLLGNVCFASSSYHFCFTLLSFAKLYVDSFGGNIDPQDFAQRLWGDMYFSSKT 286
Query: 736 RSGXNK 753
R K
Sbjct: 287 RKFTRK 292
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 48.8 bits (111), Expect(2) = 8e-09
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 171
+RN S++AHVDHGKSTL D L+ G I+ + + + D + E++R IT+K+
Sbjct: 1941 VRNFSIVAHVDHGKSTLADRLLEVTGTISKS-SDNKQVLDKLQVERERGITVKA 1993
Score = 29.1 bits (62), Expect(2) = 8e-09
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 274 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMD 450
+ + GHVDFS EV+ +L G + QT + A + I +NK+D
Sbjct: 1991 VKAQGHVDFSYEVSRSLAACQGVVLLVDAAQGVQAQTVSNFFLAFNSELTIIPALNKID 2049
>SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 359
Score = 57.2 bits (132), Expect = 1e-08
Identities = 42/147 (28%), Positives = 65/147 (44%)
Frame = +1
Query: 13 RNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFF 192
R +I+H D GK+TLT+ L+ G I A A ++ IK A S F
Sbjct: 11 RTFGIISHPDAGKTTLTEKLLLFGGAIQEAGAVKSN-------------KIKKGATSDFM 57
Query: 193 ELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXX 372
E+E + + + + + IN++D+PGH DF+ + L D +
Sbjct: 58 EIERQRGISVAT-SVLAFNYRDKKINILDTPGHKDFAEDTFRTLTAVDSVIVVIDVAKGV 116
Query: 373 XXQTETVLRQAIAERIKPILFMNKMDR 453
QTE ++ I I+F+NKMDR
Sbjct: 117 EEQTEKLVEVCRMRNIPMIVFINKMDR 143
>SB_35448| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-10)
Length = 563
Score = 52.0 bits (119), Expect = 6e-07
Identities = 29/78 (37%), Positives = 39/78 (50%)
Frame = +1
Query: 307 EVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXX 486
+V+ A+R+ DGAL QT VLRQA E I+P L +NK+DR
Sbjct: 93 QVSTAVRLCDGALVVVDVVEGVSPQTHVVLRQAWLENIRPCLVLNKIDRLITELKYSPSE 152
Query: 487 XYQTFQRIVENVNVIIAT 540
+ Q+I+E VN I T
Sbjct: 153 AFIHLQQILEQVNAITGT 170
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +1
Query: 301 SSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXX 480
+ +V+ A+R+ DGAL QT VLRQA E I+P L +NK+DR
Sbjct: 21 AGKVSTAVRLCDGALVVVDVVEGVSPQTHVVLRQAWLENIRPCLVLNKIDRLITELKYSP 80
Query: 481 XXXYQTFQRIVENVNVII 534
+ Q+I+E V+ +
Sbjct: 81 SEAFIHLQQILEQVSTAV 98
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +1
Query: 583 PSXGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFSXXKRR 738
P G+V F S + GW F++K F+ +Y+ K + L LWG+ + K +
Sbjct: 217 PDLGNVVFSSAIDGWGFSIKDFANLYSKKLGLKAEILQKTLWGDFYLDSKTK 268
>SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 36.7 bits (81), Expect = 0.022
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 244 KSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIK 423
K G I ID+PGH F+S VTD + QT +R A+ ++
Sbjct: 71 KLPSGEKITFIDTPGHAAFNSMRARGANVTDIVVLVVAADDGVKTQTVESIRHAMHAKVP 130
Query: 424 PILFMNKMDR 453
I+ +NK+D+
Sbjct: 131 LIVAINKIDK 140
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 19 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 120
++++ HVDHGK+TL D+L + + AG G T+
Sbjct: 31 VTIMGHVDHGKTTLLDAL-RNSSVAAGEAGGITQ 63
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAG 87
N+ VI HVD GKST T L+ K G
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCG 32
>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
Length = 240
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 19 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 120
++V+ HVDHGK++L D + A +I G G T+
Sbjct: 94 VTVMGHVDHGKTSLLD-YIRNANVIEGESGGITQ 126
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 265 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 444
I +D+PGH F++ +VTD + QT+ + A A + I +NK
Sbjct: 140 IAFLDTPGHEAFTAMRARGAQVTDLVIIVVAADDDVMPQTKEAISHAQAAGVPIIFAINK 199
Query: 445 MDR 453
+D+
Sbjct: 200 IDK 202
>SB_34038| Best HMM Match : Ubie_methyltran (HMM E-Value=0.0014)
Length = 267
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 646 FSEMYADKFKIDLVKLMNRLWGENFS 723
FS+MYAD+ D + LWGE F+
Sbjct: 127 FSDMYADRAVSDEARKNKALWGEGFA 152
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -3
Query: 377 THTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKL---IKKPFSLFSRWSGFVMNTKS 207
TH+P + TTT AP+ E C G+ ++L K +L R+ G
Sbjct: 612 THSPSSTPTTTGAPTTAGFNEFNLEASEDCTGDYVELRDGDSKSAALIGRYCGTNAPMML 671
Query: 206 FSSSSK 189
SS K
Sbjct: 672 MGSSDK 677
>SB_36714| Best HMM Match : RBM1CTR (HMM E-Value=0.72)
Length = 300
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 338 PSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 216
P R A TCPGE ++L+ + +RWS V+N
Sbjct: 242 PPPERQALACLRHTHTCPGEQLRLVGQ-LGHRARWSSSVIN 281
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 395 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKP 255
ST+ T + STTT A ++ TS + E+ + IKKP
Sbjct: 2817 STIGTSRPTSEAFSTTTAATGTIPDSSATSATEGLSDAETEEFIKKP 2863
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = -3
Query: 377 THTPDTQSTTTRAPSVTRSAAVTSEEKST 291
T TP+TQSTTT P T+S T E +ST
Sbjct: 346 TETPETQSTTT-TPE-TQSTTTTPETQST 372
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,157,712
Number of Sequences: 59808
Number of extensions: 483097
Number of successful extensions: 1502
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1490
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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