Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H23
(814 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 278 4e-75
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 137 9e-33
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 137 9e-33
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 136 2e-32
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 132 2e-31
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 89 3e-18
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 82 4e-16
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 81 6e-16
At5g13650.2 68418.m01585 elongation factor family protein contai... 77 1e-14
At5g13650.1 68418.m01584 elongation factor family protein contai... 77 1e-14
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 68 6e-12
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 68 6e-12
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 43 2e-04
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 37 0.014
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 36 0.042
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 34 0.098
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 34 0.098
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 34 0.098
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 34 0.098
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 33 0.17
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.69
At3g20280.2 68416.m02570 PHD finger family protein contains Pfam... 31 1.2
At3g20280.1 68416.m02569 PHD finger family protein contains Pfam... 31 1.2
At2g31060.1 68415.m03790 elongation factor family protein contai... 31 1.2
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 2.1
At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative St... 30 2.1
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 29 2.8
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.8
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 3.7
At1g66310.1 68414.m07530 F-box family protein contains F-box dom... 29 3.7
At1g18485.1 68414.m02307 pentatricopeptide (PPR) repeat-containi... 29 4.9
At5g51330.1 68418.m06364 meiosis protein-related (DYAD) (SWI1) a... 28 8.5
At4g10070.1 68417.m01647 KH domain-containing protein DNA-direct... 28 8.5
At1g66300.1 68414.m07529 F-box family protein contains F-box dom... 28 8.5
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 278 bits (681), Expect = 4e-75
Identities = 146/252 (57%), Positives = 176/252 (69%), Gaps = 2/252 (0%)
Frame = +1
Query: 7 DIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 186
+IRNMSVIAHVDHGKSTLTDSLV+ AGIIA AG+ R TDTR DE +R ITIKST IS+
Sbjct: 18 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISL 77
Query: 187 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 366
++E+ ++ L T R+ +E +LINLIDSPGHVDFSSEVTAALR+TDGAL
Sbjct: 78 YYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIE 133
Query: 367 XXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYN 546
QTETVLRQA+ ERI+P+L +NKMDR YQTF R++EN NVI+ATY
Sbjct: 134 GVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYE 193
Query: 547 DDGGPMGEVRVDPSXGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFSX 726
D +G+V+V P G+V F +GLHGWAFTL F++MYA KF + K+M RLWGENF
Sbjct: 194 DP--LLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVVESKMMERLWGENFFD 251
Query: 727 XKRR--SGXNKG 756
R SG N G
Sbjct: 252 PATRKWSGKNTG 263
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 137 bits (331), Expect = 9e-33
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 5/240 (2%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRCITIKSTAI 180
+RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R I+IK+ +
Sbjct: 138 VRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPM 197
Query: 181 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 360
S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ DGA+
Sbjct: 198 SLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDA 242
Query: 361 XXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIAT 540
TE +R AI + + ++ +NK+DR Y + +E +N I+
Sbjct: 243 AEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISA 302
Query: 541 YNDDGGPMGEVRVDPSXGSVGFGSGLHGWAFTLKQFSEMYADKFKI--DLVKLMNRLWGE 714
+ G + +DP+ G+V F SG GW+FTL+ F++MYA + D+ K +RLWG+
Sbjct: 303 ASTTAGDL--PLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWGD 360
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 137 bits (331), Expect = 9e-33
Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 5/240 (2%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR---FTDTRKDEQDRCITIKSTAI 180
+RN++++ H+ HGK+ D LV + ++ A + +TDTR DEQ+R I+IK+ +
Sbjct: 138 VRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVPM 197
Query: 181 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 360
S+ E D R KS +L N++D+PGHV+FS E+TA+LR+ DGA+
Sbjct: 198 SLVLE------------DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDA 242
Query: 361 XXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIAT 540
TE +R AI + + ++ +NK+DR Y + +E +N I+
Sbjct: 243 AEGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISA 302
Query: 541 YNDDGGPMGEVRVDPSXGSVGFGSGLHGWAFTLKQFSEMYADKFKI--DLVKLMNRLWGE 714
+ G + +DP+ G+V F SG GW+FTL+ F++MYA + D+ K +RLWG+
Sbjct: 303 ASTTAGDL--PLIDPAAGNVCFASGTAGWSFTLQSFAKMYAKLHGVAMDVDKFASRLWGD 360
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 136 bits (329), Expect = 2e-32
Identities = 91/269 (33%), Positives = 127/269 (47%), Gaps = 26/269 (9%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAG--IIAGARAGETRFTDTRKDEQDRCITIKSTAIS 183
+RN+ ++AHVDHGK+TL D L++ +G ++ AG+ RF D +EQ R IT+KS++IS
Sbjct: 9 VRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMKSSSIS 68
Query: 184 MFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXX 363
+ + K + +NLIDSPGH+DF SEV+ A R++DGAL
Sbjct: 69 LKY--------------------KDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 364 XXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATY 543
QT VLRQA E++ P L +NK+DR Y RIV VN I++ Y
Sbjct: 109 EGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAY 168
Query: 544 NDD----------GGPMG--------------EVRVDPSXGSVGFGSGLHGWAFTLKQFS 651
+ P G EV P G+V F L GW F + +F+
Sbjct: 169 KSEKYLSDVDSILASPSGELSAESLELLEDDEEVTFQPQKGNVVFVCALDGWGFGIAEFA 228
Query: 652 EMYADKFKIDLVKLMNRLWGENFSXXKRR 738
YA K L LWG + K +
Sbjct: 229 NFYASKLGASATALQKSLWGPRYYIPKTK 257
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 132 bits (320), Expect = 2e-31
Identities = 79/240 (32%), Positives = 129/240 (53%), Gaps = 5/240 (2%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGET---RFTDTRKDEQDRCITIKSTAI 180
+RN++++ H+ HGK+ D LV + ++ A R+TDTR DEQ+R I+IK+ +
Sbjct: 124 VRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAENDKHMRYTDTRVDEQERNISIKAVPM 183
Query: 181 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 360
S+ E D R KS +L N++D+PG+V+FS E+TA+LR+ DGA+
Sbjct: 184 SLVLE------------DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDA 228
Query: 361 XXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIAT 540
TE +R AI + + ++ +NK+DR Y + +E +N I+
Sbjct: 229 AQGVMVNTERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVINNHISA 288
Query: 541 YNDDGGPMGEVRVDPSXGSVGFGSGLHGWAFTLKQFSEMYADKFKI--DLVKLMNRLWGE 714
+ + + +DP+ G+V F SG GW+FTL+ F+ MYA + D+ K +RLWG+
Sbjct: 289 ASTNAADL--PLIDPAAGNVCFASGTAGWSFTLQSFARMYAKLHGVAMDVDKFASRLWGD 346
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 89.0 bits (211), Expect = 3e-18
Identities = 54/148 (36%), Positives = 80/148 (54%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMF 189
IRN S+IAH+DHGKSTL D L+ G I G+ ++ D K +++R IT+K+ +MF
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTIKKGH-GQPQYLD--KLQRERGITVKAQTATMF 122
Query: 190 FELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXX 369
+E + +D + G+L+NLID+PGHVDFS EV+ +L GAL
Sbjct: 123 YENKVED-----------QEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Query: 370 XXXQTETVLRQAIAERIKPILFMNKMDR 453
QT A + + +NK+D+
Sbjct: 172 VQAQTVANFYLAFEANLTIVPVINKIDQ 199
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 82.2 bits (194), Expect = 4e-16
Identities = 54/148 (36%), Positives = 76/148 (51%)
Frame = +1
Query: 7 DIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 186
+IRN S+IAH+DHGKSTL D L+ G + R + +F D E++R ITIK A M
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTVQN-RDMKEQFLDNMDLERERGITIKLQAARM 143
Query: 187 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 366
+ E+ F +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 144 RYVYEDTP----------------FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQ 187
Query: 367 XXXXQTETVLRQAIAERIKPILFMNKMD 450
QT + A+ ++ I +NK+D
Sbjct: 188 GVEAQTLANVYLALENNLEIIPVLNKID 215
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 81.4 bits (192), Expect = 6e-16
Identities = 57/153 (37%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Frame = +1
Query: 7 DIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGE----TRFTDTRKDEQDRCITIKST 174
D RN+ ++AH+D GK+T T+ ++ G + GE T D + EQ+R ITI S
Sbjct: 95 DYRNIGIMAHIDAGKTTTTERILYYTG--RNYKIGEVHEGTATMDWMEQEQERGITITSA 152
Query: 175 AISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXX 354
A + F++ IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 153 ATTTFWDKHR--------------------INIIDTPGHVDFTLEVERALRVLDGAICLF 192
Query: 355 XXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 453
Q+ETV RQA + I F+NKMDR
Sbjct: 193 DSVAGVEPQSETVWRQADKYGVPRICFVNKMDR 225
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 77.4 bits (182), Expect = 1e-14
Identities = 47/149 (31%), Positives = 76/149 (51%)
Frame = +1
Query: 7 DIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 186
++RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S S+
Sbjct: 82 NVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILSKNTSI 141
Query: 187 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 366
+ K +N+ID+PGH DF EV L + DG L
Sbjct: 142 TY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVE 181
Query: 367 XXXXQTETVLRQAIAERIKPILFMNKMDR 453
QT VL++A+ ++ +NK+DR
Sbjct: 182 GPMPQTRFVLKKALEFGHAVVVVVNKIDR 210
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 77.4 bits (182), Expect = 1e-14
Identities = 47/149 (31%), Positives = 76/149 (51%)
Frame = +1
Query: 7 DIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISM 186
++RN++++AHVDHGK+TL DS++ +A + + + R D+ E++R ITI S S+
Sbjct: 81 NVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILSKNTSI 140
Query: 187 FFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXX 366
+ K +N+ID+PGH DF EV L + DG L
Sbjct: 141 TY--------------------KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVE 180
Query: 367 XXXXQTETVLRQAIAERIKPILFMNKMDR 453
QT VL++A+ ++ +NK+DR
Sbjct: 181 GPMPQTRFVLKKALEFGHAVVVVVNKIDR 209
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 68.1 bits (159), Expect = 6e-12
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRCITIKST 174
+RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++ ITI+S
Sbjct: 65 LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSA 124
Query: 175 AISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXX 354
A + K + +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 125 ATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVL 164
Query: 355 XXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 453
Q+ TV RQ + + F+NK+DR
Sbjct: 165 CSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 68.1 bits (159), Expect = 6e-12
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Frame = +1
Query: 10 IRNMSVIAHVDHGKSTLTDSLVSKAGII-----AGARAGETRFTDTRKDEQDRCITIKST 174
+RN+ + AH+D GK+TLT+ ++ G I R G D+ E+++ ITI+S
Sbjct: 65 LRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSA 124
Query: 175 AISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXX 354
A + K + +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 125 ATYCTW--------------------KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVL 164
Query: 355 XXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 453
Q+ TV RQ + + F+NK+DR
Sbjct: 165 CSVGGVQSQSITVDRQMRRYEVPRVAFINKLDR 197
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 1/147 (0%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N+ I HVDHGK+TLT +L I + A + D +E+ R ITI + + +E
Sbjct: 81 NIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGITINTATVE--YE 138
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 375
E + +D PGH D+ + DGA+
Sbjct: 139 TENRHYAH------------------VDCPGHADYVKNMITGAAQMDGAILVVSGADGPM 180
Query: 376 XQT-ETVLRQAIAERIKPILFMNKMDR 453
QT E +L ++F+NK D+
Sbjct: 181 PQTKEHILLAKQVGVPDMVVFLNKEDQ 207
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 37.1 bits (82), Expect = 0.014
Identities = 28/110 (25%), Positives = 49/110 (44%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N++++ HVD GKSTL+ L+ G R + + K+ + + + A ++
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLG-----RISQKQMHKYEKEAKLQGKGSFAYAWALDES 295
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 345
EE++ + K + L+DSPGH DF + A D A+
Sbjct: 296 AEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAI 345
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 35.5 bits (78), Expect = 0.042
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N+ I HVDHGK+TLT ++ A+A D +E+ R ITI + + +E
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVE--YE 126
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXX 375
++ +D PGH D+ + DG +
Sbjct: 127 TAKRHYAH------------------VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPM 168
Query: 376 XQTETVLRQAIAERIKPIL-FMNKMD 450
QT+ + A + ++ F+NK+D
Sbjct: 169 PQTKEHILLARQVGVPSLVCFLNKVD 194
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 34.3 bits (75), Expect = 0.098
Identities = 33/110 (30%), Positives = 49/110 (44%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N+ VI HVD GKST T L+ K G I R E RF + R + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKYAWVLDKLK 64
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 345
E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 34.3 bits (75), Expect = 0.098
Identities = 33/110 (30%), Positives = 49/110 (44%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N+ VI HVD GKST T L+ K G I R E RF + R + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKYAWVLDKLK 64
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 345
E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 34.3 bits (75), Expect = 0.098
Identities = 33/110 (30%), Positives = 49/110 (44%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N+ VI HVD GKST T L+ K G I R E RF + R + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKYAWVLDKLK 64
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 345
E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 34.3 bits (75), Expect = 0.098
Identities = 33/110 (30%), Positives = 49/110 (44%)
Frame = +1
Query: 16 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 195
N+ VI HVD GKST T L+ K G I R E RF + R + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGI-DKRVIE-RFEKEAAEMNKR--SFKYAWVLDKLK 64
Query: 196 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 345
E + + I + ++ K + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETTK-YYCTVIDAPGHRDFIKNMITGTSQADCAV 113
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 274 IDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 453
+D+PGH F + RVTD A+ QT + A A + ++ +NK+D+
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK 616
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 19 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR 120
++++ HVDHGK+TL D + K+ + A G T+
Sbjct: 504 ITIMGHVDHGKTTLLD-YIRKSKVAASEAGGITQ 536
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +1
Query: 250 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 429
+ G I +D+PGH FS VTD + QT + A + + +
Sbjct: 265 DSGTSITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVV 324
Query: 430 LFMNKMDR 453
+ +NK D+
Sbjct: 325 VAINKCDK 332
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 19 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAG 111
++V+ HVDHGK++L D+L + + +A AG
Sbjct: 222 VTVMGHVDHGKTSLLDALRNTS--VAAREAG 250
>At3g20280.2 68416.m02570 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 482
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 392 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 294
T S T PD ST T APSVT+ + + EK+
Sbjct: 383 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 415
>At3g20280.1 68416.m02569 PHD finger family protein contains Pfam
profile: PF00628 PHD-finger
Length = 743
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 392 TVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKS 294
T S T PD ST T APSVT+ + + EK+
Sbjct: 644 TASPATVVPDQDSTITAAPSVTQEDSAFNTEKT 676
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 328 VTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 453
+ +GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 1 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDR 42
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 29 SPTSITASQPSRTRWFPRPVSLLVRE 106
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At1g04220.1 68414.m00412 beta-ketoacyl-CoA synthase, putative
Strong similarity to beta-keto-Coa synthase gb|U37088
from Simmondsia chinensis, GI:4091810
Length = 528
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 414 LGNSLTQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREIN 292
L N + C S Y HTV HKGS D +C ++RE N
Sbjct: 299 LSNRSSDRCRSKY-QLIHTVRTHKGS-DDNAFNCVYQREDN 337
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 47 ASQPSRTRWFPRPVSLLVREPERPVSLTRVR-TNKTVASPLNLRPSLCSSSLKRK 208
A Q S + W PR S + P++ + T+ V+ N PS+ S LKRK
Sbjct: 695 AKQSSSSPWVPRHTSSVAHPPKQENYIKHHNSTSSRVSKESNRTPSVSSYPLKRK 749
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 265 INLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 444
I +ID+PGH F++ + + D A+ QT L +K I+ +NK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNK 617
Query: 445 MDR 453
+DR
Sbjct: 618 VDR 620
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 29 SPTSITASQPSRTRWFPRPVSLLVRE 106
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At1g66310.1 68414.m07530 F-box family protein contains F-box domain
Pfam:PF00646
Length = 442
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 521 LTSL*PHITMMVVPWVRCVSTLAXALLVSGLVFMGGLS 634
LTSL P + ++V+ WV+ + LA +L+SG + + L+
Sbjct: 161 LTSL-PCVKVIVLEWVKFANDLALEMLISGCLVLESLT 197
>At1g18485.1 68414.m02307 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 970
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 598 VGFGSGLHGWAFTLKQFSEMYADKFKIDL 684
+G G G+HGWA L+ E+ + +D+
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLNNALMDM 336
>At5g51330.1 68418.m06364 meiosis protein-related (DYAD) (SWI1)
annotation temporarily based on supporting cDNA
gi|18483289|gb|AF466153.1|; supporting cDNA are SWITCH1
splice variant S and SWITCH1 splice variant L (SWI1)
GI:16033413 and GI:16033410
Length = 639
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 5 WISATCL*SPTSITASQPSRTRWFPRPVSLLVREPERPVSLTRVRTNKTVASPLNL 172
W L + T AS PS + +P P + +RP+ LT T +P NL
Sbjct: 581 WPQLPALAAATDTNASSPSHRQAYPSPFPVKPLAAKRPLGLTFPFTIIPEEAPKNL 636
>At4g10070.1 68417.m01647 KH domain-containing protein DNA-directed
RNA polymerase (EC 2.7.7.6) II largestchain - mouse,
PIR2:A28490
Length = 725
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -1
Query: 583 GRHAPHPWDHHHR 545
G HAPHP+D+H R
Sbjct: 375 GPHAPHPYDYHPR 387
>At1g66300.1 68414.m07529 F-box family protein contains F-box domain
Pfam:PF00646
Length = 456
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +2
Query: 536 PHITMMVVPWVRCVSTLAXALLVSGLVFMGGLS--PSNN 646
P + ++V+ WV+ + LA +L+SG + + L+ SNN
Sbjct: 175 PSVKVIVLDWVKFANDLALEMLISGCLVLKSLTLCRSNN 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,640,635
Number of Sequences: 28952
Number of extensions: 331715
Number of successful extensions: 1085
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1853336000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -