Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H22
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    87   1e-19
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    87   1e-19
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    82   6e-18
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   4.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   4.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 87.4 bits (207), Expect = 1e-19
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +3

Query: 606 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 743
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFE
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFE 46



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 745 VKSXAGDTHLGGEDFDNRMV 804
           VK+ AGDTHLGGEDFDNR+V
Sbjct: 47  VKATAGDTHLGGEDFDNRLV 66


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 87.4 bits (207), Expect = 1e-19
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = +3

Query: 606 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 743
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFE
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFE 46



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 745 VKSXAGDTHLGGEDFDNRMV 804
           VK+ AGDTHLGGEDFDNR+V
Sbjct: 47  VKATAGDTHLGGEDFDNRLV 66


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 81.8 bits (193), Expect = 6e-18
 Identities = 37/46 (80%), Positives = 44/46 (95%)
 Frame = +3

Query: 606 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFE 743
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FE
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFE 45



 Score = 32.7 bits (71), Expect = 0.004
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +1

Query: 745 VKSXAGDTHLGGEDFDNRMV 804
           V + +GDTHLGGEDFD +++
Sbjct: 46  VVATSGDTHLGGEDFDQKVM 65


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 378 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 503
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 561 TKDAGTISGLNVLRIINEPTAA 626
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +2

Query: 449 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 574
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,764
Number of Sequences: 336
Number of extensions: 3803
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)