Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H22
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   3.5  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   3.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   3.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   3.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   6.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   8.1  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 661 ENEMYLSLTSAAVPSTCPSLPSRMVFSRVKSXAGDTHLGGEDFDNRM 801
           +NE  L+  S+   S   +LP+ +  +   + +  +    EDFDN +
Sbjct: 119 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 165


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 661 ENEMYLSLTSAAVPSTCPSLPSRMVFSRVKSXAGDTHLGGEDFDNRM 801
           +NE  L+  S+   S   +LP+ +  +   + +  +    EDFDN +
Sbjct: 167 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 213


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 661 ENEMYLSLTSAAVPSTCPSLPSRMVFSRVKSXAGDTHLGGEDFDNRM 801
           +NE  L+  S+   S   +LP+ +  +   + +  +    EDFDN +
Sbjct: 167 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 213


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 661 ENEMYLSLTSAAVPSTCPSLPSRMVFSRVKSXAGDTHLGGEDFDNRM 801
           +NE  L+  S+   S   +LP+ +  +   + +  +    EDFDN +
Sbjct: 167 QNETILTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDFDNEI 213


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 549 QRQATKDAGTISGLNVLRIINEPTAAAIAYG 641
           Q +A K A  +   N   II+EPT     YG
Sbjct: 353 QAEAEKHAAMLYQYNFNIIISEPTERISPYG 383


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 803 TMRLSKSSPPKWVSPAXDFTLE 738
           T RL    PP+W+    D ++E
Sbjct: 697 TQRLVVHVPPRWIVEPTDVSVE 718


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,839
Number of Sequences: 438
Number of extensions: 4172
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)