Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H21
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0052 + 18683077-18683385                                         29   6.4  
05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598     29   6.4  
07_03_1572 - 27815760-27815819,27816374-27816494,27816580-278166...    28   8.4  
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883...    28   8.4  
06_01_0788 - 5895600-5896378,5896519-5896846                           28   8.4  

>11_05_0052 + 18683077-18683385
          Length = 102

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 699 HPPRTAXGCSRHRHRSRA 646
           HPP TA GC  H HR  +
Sbjct: 60  HPPCTACGCLSHHHRGES 77


>05_05_0332 - 24145999-24146052,24146749-24147117,24147158-24147598
          Length = 287

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -1

Query: 537 RPFHTDTRAALDIQYICPTPSARSWETSDPPVHPRIPCRHCWTG 406
           R F    RA L+ +  CP   AR W  +   + PR  CR  W G
Sbjct: 175 RAFLVGHRAPLEPRVRCPYCGARVWSMTAAGLAPRSACR--WLG 216


>07_03_1572 -
           27815760-27815819,27816374-27816494,27816580-27816620,
           27816737-27816797,27817549-27817635,27817728-27817855,
           27817935-27818050,27820671-27820789,27820892-27820983,
           27821082-27821169,27822523-27822902
          Length = 430

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 567 KHCHHDADELIIGGTDAGVNEYPHMVLLGYGDDVANIXW 683
           +H +  AD + +   +A +     MVLLG+ DDV ++ W
Sbjct: 147 QHFNFTADSMWLVEYNAALASVCFMVLLGFIDDVLDVPW 185


>06_03_1457 - 30287185-30287287,30287691-30287759,30288212-30288351,
            30288447-30288641,30288743-30289363,30289688-30290257,
            30290332-30293638,30293764-30293863,30293978-30295014,
            30295256-30295604,30296299-30296374,30296456-30297022,
            30297094-30297238,30298281-30298405,30298491-30298582,
            30298646-30298828,30298946-30299058,30299499-30299649,
            30299720-30299882
          Length = 2701

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +3

Query: 432  CEDVPADLTS---PKTGQKAWDKCIEYQEQLVYPC 527
            C+ +P + +S    K GQK W +   Y ++++ PC
Sbjct: 1369 CQSLPNESSSCKMSKRGQKLWGRFSSYVKEIIAPC 1403


>06_01_0788 - 5895600-5896378,5896519-5896846
          Length = 368

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2

Query: 518 HELLLIFNTFVPRLLPGLGRRQIRRYILAFLVAIVGLVIIGGWY 387
           HE  L  +   PR+    GRRQI+  +L F  A  G  I  G Y
Sbjct: 252 HEGFLYCHMVEPRMAIVDGRRQIQHGLLPFRKAFKGTFIAAGGY 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,250,077
Number of Sequences: 37544
Number of extensions: 452598
Number of successful extensions: 1196
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)