Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H18
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 368 PVPYPVEKHVPYPVKVAVPQP 430
           PVP PVE+    P     P P
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAP 412


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 159 RGLLNLGYGYGIDGLDVGYIGHGQGLGGA 245
           +  LNL   +G DG D+ +   GQ  G A
Sbjct: 127 KSALNLVQKWGFDGFDLDWEYPGQRGGAA 155


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 165 LLNLGYGYGIDGLDVGYIGHG 227
           LL LGY   +   D  Y+ HG
Sbjct: 472 LLELGYRIIVSTKDAWYLDHG 492


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 423 PNPTRSSNTCH 455
           PNP ++  TCH
Sbjct: 228 PNPCQNGGTCH 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,359
Number of Sequences: 336
Number of extensions: 3399
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)