Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H17
(817 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 348 3e-96
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 348 3e-96
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 347 7e-96
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 347 7e-96
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 330 6e-91
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 330 6e-91
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 317 6e-87
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 170 8e-43
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 169 3e-42
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 167 8e-42
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 167 8e-42
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 166 2e-41
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 165 2e-41
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 164 5e-41
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 164 5e-41
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 160 1e-39
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 122 2e-28
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 122 3e-28
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.2
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 2.8
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.7
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 28 8.5
At3g19180.1 68416.m02435 cell division protein-related weak simi... 28 8.5
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 348 bits (855), Expect = 3e-96
Identities = 154/188 (81%), Positives = 171/188 (90%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRECIS+H+GQAG+Q+GNACWELYCLEHGI PDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEAIYDICRR L IER YTNLN L+
Sbjct: 205 DNEAIYDICRRSLSIERPTYTNLNRLV 231
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 348 bits (855), Expect = 3e-96
Identities = 154/188 (81%), Positives = 171/188 (90%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRECIS+H+GQAG+Q+GNACWELYCLEHGI PDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEAIYDICRR L IER YTNLN L+
Sbjct: 205 DNEAIYDICRRSLSIERPTYTNLNRLV 231
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 347 bits (852), Expect = 7e-96
Identities = 154/188 (81%), Positives = 170/188 (90%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRECIS+H+GQAG+Q+GNACWELYCLEHGI PDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEAIYDICRR L+IER YTNLN L+
Sbjct: 205 DNEAIYDICRRSLNIERPTYTNLNRLV 231
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 347 bits (852), Expect = 7e-96
Identities = 154/188 (81%), Positives = 170/188 (90%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRECIS+H+GQAG+Q+GNACWELYCLEHGI PDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEAIYDICRR L+IER YTNLN L+
Sbjct: 205 DNEAIYDICRRSLNIERPTYTNLNRLV 231
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 330 bits (811), Expect = 6e-91
Identities = 147/188 (78%), Positives = 165/188 (87%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEAIYDICRR LDIER YTNLN LI
Sbjct: 205 DNEAIYDICRRSLDIERPTYTNLNRLI 231
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 330 bits (811), Expect = 6e-91
Identities = 147/188 (78%), Positives = 165/188 (87%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEAIYDICRR LDIER YTNLN LI
Sbjct: 205 DNEAIYDICRRSLDIERPTYTNLNRLI 231
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 317 bits (778), Expect = 6e-87
Identities = 139/188 (73%), Positives = 163/188 (86%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE IS+H+GQAG+Q+GN+CWELYCLEHGI PDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
R+RKLAD CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTA
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 658 VVEPYNSI 681
VVEPYNS+
Sbjct: 181 VVEPYNSV 188
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 693 HNPXSTLTVLSWXDNEAIYDICRRXLDIERQXYTNLNXLI 812
H+ V+ DNEAIYDICRR LDIER Y+NLN LI
Sbjct: 192 HSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLI 231
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 170 bits (414), Expect = 8e-43
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 3/190 (1%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGD---DSFNTFFSETG 288
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 289 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 468
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 469 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 648
VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+V
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 175
Query: 649 STAVVEPYNS 678
S VVEPYN+
Sbjct: 176 SDTVVEPYNA 185
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLI 229
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 169 bits (410), Expect = 3e-42
Identities = 77/187 (41%), Positives = 114/187 (60%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 180 VVEPYNA 186
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 204 DNEALYDICFRTLKLSTPSFGDLNHLI 230
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 167 bits (406), Expect = 8e-42
Identities = 77/187 (41%), Positives = 112/187 (59%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLI 229
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 167 bits (406), Expect = 8e-42
Identities = 77/187 (41%), Positives = 112/187 (59%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLI 229
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (403), Expect = 2e-41
Identities = 76/187 (40%), Positives = 114/187 (60%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 120 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 179
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 180 VVEPYNA 186
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 204 DNEALYDICFRTLKLSTPSFGDLNHLI 230
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 165 bits (402), Expect = 2e-41
Identities = 77/187 (41%), Positives = 113/187 (60%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLANPTFGDLNHLI 229
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 164 bits (399), Expect = 5e-41
Identities = 76/187 (40%), Positives = 112/187 (59%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 32.3 bits (70), Expect = 0.40
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLTTPSFGDLNHLI 229
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 164 bits (399), Expect = 5e-41
Identities = 76/187 (40%), Positives = 114/187 (60%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ C LQGF + H LL+ ++ +Y + + F+++P+P+VS
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLSTPSFGDLNHLI 229
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 160 bits (388), Expect = 1e-39
Identities = 75/187 (40%), Positives = 112/187 (59%)
Frame = +1
Query: 118 MRECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGK 297
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 298 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 477
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 478 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTA 657
+RK A+ LQGF + H LL+ ++ +Y + + F+++P+P+VS
Sbjct: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDT 178
Query: 658 VVEPYNS 678
VVEPYN+
Sbjct: 179 VVEPYNA 185
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 732 DNEAIYDICRRXLDIERQXYTNLNXLI 812
DNEA+YDIC R L + + +LN LI
Sbjct: 203 DNEALYDICFRTLKLANPTFGDLNHLI 229
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 122 bits (295), Expect = 2e-28
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +1
Query: 121 RECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 300
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 301 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 474
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 475 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVS 651
D I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 652 TAVVEPYNSI 681
VV+PYNS+
Sbjct: 180 DVVVQPYNSL 189
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 122 bits (294), Expect = 3e-28
Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 3/190 (1%)
Frame = +1
Query: 121 RECISVHVGQAGVQIGNACWELYCLEHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 300
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 301 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 474
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 475 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVS 651
D I + AD L+GF++ H L+E L+ Y KK ++++P + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 652 TAVVEPYNSI 681
VV+PYNS+
Sbjct: 180 DVVVQPYNSL 189
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2
Query: 555 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 376
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 375 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 241
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.5 bits (63), Expect = 2.8
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 324 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRMDAVLQAVKLPAGITD---LDS 154
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 153 G-LANVYRDALTHF 115
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 287 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 162
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 196 EHGIHPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 345
E GI +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At3g19180.1 68416.m02435 cell division protein-related weak
similarity to cell division protein Ftn2 [Synechococcus
sp. PCC 7942] GI:16226084
Length = 819
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 101 KKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASILMARCPQTR 238
K+L+S SA ++ ESRS S AW S+L A P TR
Sbjct: 427 KQLESNSDSAVRNSILGKESRSTSATPSLEAWLMESVL-ANFPDTR 471
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,353
Number of Sequences: 28952
Number of extensions: 390014
Number of successful extensions: 1142
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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