Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H15
(853 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 29 0.63
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 29 0.63
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 29 0.63
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 29 0.84
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 29 0.84
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 27 2.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.4
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 27 3.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 4.5
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 27 4.5
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.9
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 26 5.9
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 26 7.8
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 26 7.8
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 26 7.8
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 150 KPT*VQSVVYKLFN*NDSLSVVCFGSYSRNNRRLWPRKAVIKIWRFDCLRETG-HCGRTQ 326
+ T +Q ++ FN + + + F +YS N+ +W + + IW+ + ETG +C +
Sbjct: 8 RDTVIQKSFFEEFN-SQNREMGSF-AYSGNSESVWTGENITSIWKTILINETGSYCVAAR 65
Query: 327 PSQTD 341
P D
Sbjct: 66 PMTMD 70
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 150 KPT*VQSVVYKLFN*NDSLSVVCFGSYSRNNRRLWPRKAVIKIWRFDCLRETG-HCGRTQ 326
+ T +Q ++ FN + + + F +YS N+ +W + + IW+ + ETG +C +
Sbjct: 8 RDTVIQKSFFEEFN-SQNREMGSF-AYSGNSESVWTGENITSIWKTILINETGSYCVAAR 65
Query: 327 PSQTD 341
P D
Sbjct: 66 PMTMD 70
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 150 KPT*VQSVVYKLFN*NDSLSVVCFGSYSRNNRRLWPRKAVIKIWRFDCLRETG-HCGRTQ 326
+ T +Q ++ FN + + + F +YS N+ +W + + IW+ + ETG +C +
Sbjct: 8 RDTVIQKSFFEEFN-SQNREMGSF-AYSGNSESVWTGENITSIWKTILINETGSYCVAAR 65
Query: 327 PSQTD 341
P D
Sbjct: 66 PMTMD 70
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 29.1 bits (62), Expect = 0.84
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 225 SYSRNNRRLWPRKAVIKIWRFDCLRETG-HCGRTQPSQTD 341
+YS N+ +W + + IW+ + ETG +C +P D
Sbjct: 3 AYSGNSESVWTGENITSIWKTILINETGSYCVAARPMTMD 42
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 29.1 bits (62), Expect = 0.84
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 349 LGQITKQPPAANMMEMIWDDELAATA 426
+GQIT++ A EMIWD ++A +A
Sbjct: 410 IGQITEKDVARVASEMIWDKDIAVSA 435
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 554 SAPDFQKQINAWFDEVGKYGSKPITGGHGTGHYSQ-LVWGETS 679
S P+F++ + DE+ G PI G GT +Y Q L++ +T+
Sbjct: 73 SVPEFERDASRVIDEIHSQGKIPIVVG-GTHYYLQSLLFEDTT 114
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 625 DRLGAVFTDFIEPSIDLLLEVRRRVGWFSWWTSCPSGCEVLSXQG 491
D + V DF+E + E W W T PSG ++LS G
Sbjct: 1995 DHVSPVEIDFLENDENSSSEQDDEFQW-EWNTETPSGADILSRHG 2038
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 97 ITSENILYSSYESQLKRENQLKFRVLCINFLIKMIPLV 210
I E + + Y SQL NQ F L LI+MIP++
Sbjct: 65 IGDEPLQKNLYLSQLSVTNQTLFYALISQHLIEMIPII 102
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 540 LNHPTLRLTSRSKSMLGSMKSVNTAPSLS 626
L+HPT+ +S S S+L S +++ P +S
Sbjct: 176 LSHPTIVPSSNSSSLLNSTNNISHNPQVS 204
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 480 FGQIPXLDRTSQPLGQLVHQLNHPTLRLTSRSKSMLGSMK 599
FG+ P D + Q +H +HPTL ++ MLG +K
Sbjct: 104 FGEKPAEDTKDENRSQPIHDPDHPTLEDVAQ---MLGKLK 140
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 129 VTRI*NVLTRNLRNVKLLLLF 67
V ++ NVL RN RN KLL+ F
Sbjct: 549 VIQVKNVLHRNRRNAKLLIAF 569
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 526 CPSGCEVLSXQGICPNHVGQRGRERVYIDR 437
CP+ CE GI + VG + ER ID+
Sbjct: 1709 CPAPCEGACTLGIIESPVGIKSVERAIIDK 1738
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.8 bits (54), Expect = 7.8
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +3
Query: 426 STLVRSMYTRSRPRCPT*FGQIPXLDRTSQPLGQL--VHQLNHPTLRLTSRSKSMLGSMK 599
S L S + RS PRC T + TS+P + V N + + S S L S
Sbjct: 269 SLLSSSKFFRSSPRCSTPSVSSTFVSATSEPEVETYSVSTKNSSSNKNLRSSLSKLLSTS 328
Query: 600 SVNTAP-SLSREVMALDTIHS 659
++N P SLS ++ +I S
Sbjct: 329 NLNNKPLSLSSTAPSMPSIGS 349
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -3
Query: 260 PGPQPSVVARIAPKTNNTKGIILIKKFIHNTLNLSWFSR 144
PG + + +I K N+ +G+IL + +H + ++ R
Sbjct: 889 PGERREIHIKIRAKPNSQEGLILFESSVHKPEDTEFYVR 927
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 199 IPLVLFVLGAILATTEGCGPGKQ 267
+PL+L + A L+T+ GPGK+
Sbjct: 144 VPLILNEMDAFLSTSPDFGPGKE 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,470,484
Number of Sequences: 5004
Number of extensions: 72317
Number of successful extensions: 204
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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