Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H15
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.5  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    23   2.7  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    23   2.7  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    23   2.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   4.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   4.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 100 TSENILYSSYESQLKRENQ 156
           +SEN+ Y + ES +K ENQ
Sbjct: 270 SSENLYYVNTESLMKSENQ 288


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 580 DLLLEVRRRVGWFSWWT 530
           D +LEV  ++ WF  WT
Sbjct: 126 DNMLEVSSKMPWFKGWT 142


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 580 DLLLEVRRRVGWFSWWT 530
           D +LEV  ++ WF  WT
Sbjct: 142 DNMLEVSSKMPWFKGWT 158


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 580 DLLLEVRRRVGWFSWWT 530
           D +LEV  ++ WF  WT
Sbjct: 199 DNMLEVSSKMPWFKGWT 215


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 533 PPTEPSDSAPDFQKQINAWFDEVGKYGSKPITG 631
           PP  PS S PD  K ++  FD   K  +  ++G
Sbjct: 344 PPPPPSSSGPDSAK-LDKIFDIATKENAMLLSG 375


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
 Frame = +1

Query: 322 HNRLRQT-VALGQITKQPPAANMMEMIWDDELAATAQRWSDQCIPA-------HDRAAQR 477
           ++ +R T ++ G   ++    N M+ IW+D++  T  RW +  +P+       +D +   
Sbjct: 33  NDNIRNTLISNGDYIEENNMPNGMQ-IWNDKVFITIPRWKNG-VPSNLNFFLKNDESESP 90

Query: 478 DLGRFPXW 501
            L  +P W
Sbjct: 91  KLNPYPNW 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,887
Number of Sequences: 438
Number of extensions: 5225
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)