Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H15
(853 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09590.1 68416.m01139 pathogenesis-related protein, putative ... 41 0.001
At2g19980.1 68415.m02336 allergen V5/Tpx-1-related family protei... 40 0.002
At4g25780.1 68417.m03710 pathogenesis-related protein, putative ... 37 0.020
At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protei... 37 0.020
At1g50060.1 68414.m05617 pathogenesis-related protein, putative ... 36 0.045
At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protei... 34 0.10
At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1) i... 34 0.10
At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1) i... 34 0.14
At2g14580.1 68415.m01633 pathogenesis-related protein, putative ... 34 0.14
At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protei... 33 0.24
At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protei... 33 0.24
At5g26130.1 68418.m03108 pathogenesis-related protein, putative ... 33 0.32
At4g33710.1 68417.m04787 pathogenesis-related protein, putative ... 32 0.56
At4g31470.1 68417.m04471 pathogenesis-related protein, putative ... 32 0.56
At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protei... 32 0.56
At4g33730.1 68417.m04789 pathogenesis-related protein, putative ... 31 1.3
At2g19970.1 68415.m02335 pathogenesis-related protein, putative ... 30 1.7
At4g33720.1 68417.m04788 pathogenesis-related protein, putative ... 30 2.2
At1g50050.1 68414.m05616 pathogenesis-related protein, putative ... 30 2.2
At5g01450.1 68418.m00058 expressed protein 29 5.2
At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protei... 28 9.1
>At3g09590.1 68416.m01139 pathogenesis-related protein, putative
similar to SP|Q05968 Pathogenesis-related protein 1
precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 186
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 569 QKQINAWFDEVGKYGSKPITGGHGT--GHYSQLVWGETSHVGC 691
+K + WF+E Y K T G GHY+Q+VW ET+ VGC
Sbjct: 115 EKVVTRWFEERFNYDVKTNTCAPGKMCGHYTQMVWRETTAVGC 157
>At2g19980.1 68415.m02336 allergen V5/Tpx-1-related family protein
low similarity to SP|P33154 Pathogenesis-related protein
1 precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/69 (31%), Positives = 30/69 (43%)
Frame = +2
Query: 488 DSLXGQNLAATWATRPPTEPSDSAPDFQKQINAWFDEVGKYGSKPITGGHGTGHYSQLVW 667
D G+N+AA W T A F WF E Y GHY+Q+V
Sbjct: 74 DGTYGENIAAGWVQPMDTMSGPIATKF------WFTEKPYYNYATNKCSEPCGHYTQIVA 127
Query: 668 GETSHVGCG 694
+++H+GCG
Sbjct: 128 NQSTHLGCG 136
>At4g25780.1 68417.m03710 pathogenesis-related protein, putative
similar to gene PR-1 protein - Medicago truncatula,
SP|Q40374; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 190
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 608 YGSKPITGGHGTGHYSQLVWGETSHVGC 691
YGS G GHY+Q+VW T VGC
Sbjct: 135 YGSNTCDAGQMCGHYTQIVWKSTRRVGC 162
>At1g01310.1 68414.m00047 allergen V5/Tpx-1-related family protein
similar to pathogenesis related protein-1 GB:AAC25629
GI:3290004 from [Zea mays]; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 241
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPIT--GGHGTGHYSQLVWGETSHVGC 691
+N W DE Y K T H GHY+Q+VW +++ VGC
Sbjct: 152 VNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGC 191
>At1g50060.1 68414.m05617 pathogenesis-related protein, putative
similar to prb-1b [Nicotiana tabacum] GI:19970; contains
Pfam profile PF00188: SCP-like extracellular protein
Length = 161
Score = 35.5 bits (78), Expect = 0.045
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 413 WQLLLNAGPINVYPLTTALPNVIWADSLXGQNLAATWATRPPTEPSDSAPDFQKQINAWF 592
W L A +N A N++ ++ G+NLA + S S+ + W
Sbjct: 48 WDTTLAAYALNYSNFRKADCNLVHSNGPYGENLA---------KGSSSSFSAISAVKLWV 98
Query: 593 DEVG--KYGSKPITGGHGTGHYSQLVWGETSHVGC 691
DE Y TGG HY+Q+VW ++ +GC
Sbjct: 99 DEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGC 133
>At5g02730.1 68418.m00214 allergen V5/Tpx-1-related family protein
low similarity to SP|Q05968 Pathogenesis-related protein
1 precursor {Hordeum vulgare}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 205
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 569 QKQINAWFDEVGKYGSKPITGGHGT--GHYSQLVWGETSHVGC 691
++ ++ W DE Y T G GHY+Q+VW T+ VGC
Sbjct: 122 RRVVDKWMDESLNYDRVANTCKSGAMCGHYTQIVWRTTTAVGC 164
>At2g19990.1 68415.m02337 pathogenesis-related protein 1 (PR-1)
identical to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains an extracellular proteins
SCP/Tpx-1/Ag5/PR-1/Sc7 signature (PDOC00772)
Length = 176
Score = 34.3 bits (75), Expect = 0.10
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 500 GQNLAATWATRPPTEPSDSAPDFQKQINAWFDEVGKYGSKPIT-GGHGT-GHYSQLVWGE 673
G+NLAA W T S P + W E Y T GG G GHY+Q+VW +
Sbjct: 92 GENLAAGWGTM-------SGPVATEY---WMTEKENYDYDSNTCGGDGVCGHYTQIVWRD 141
Query: 674 TSHVGC 691
+ +GC
Sbjct: 142 SVRLGC 147
>At2g14610.1 68415.m01643 pathogenesis-related protein 1 (PR-1)
identical to GB:M90508 SP|P33154
Length = 161
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPITGGHGTGHYSQLVWGETSHVGC 691
+N W E Y T GHY+Q+VW ++ +GC
Sbjct: 96 VNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSVRLGC 133
>At2g14580.1 68415.m01633 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 161
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPITGGHGTGHYSQLVWGETSHVGC 691
+N W +E Y T GHY+Q+VW + +GC
Sbjct: 96 VNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSVRLGC 133
>At5g57625.1 68418.m07199 allergen V5/Tpx-1-related family protein
low similarity to SP|Q40374 Pathogenesis-related protein
PR-1 precursor {Medicago truncatula}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 207
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 548 SDSAPDFQKQINAWFDEVGKYG--SKPITGGHGTGHYSQLVWGETSHVGC 691
S AP F Q +W E Y + G GHY+Q+VW +T +GC
Sbjct: 131 SSWAPGFAVQ--SWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGC 178
>At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 210
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPIT--GGHGTGHYSQLVWGETSHVGC 691
+ +W E Y T G GHY+Q+VW ET +GC
Sbjct: 142 VESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGC 181
>At5g26130.1 68418.m03108 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 164
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKY--GSKPITGGHGTGHYSQLVWGETSHVGC 691
+ W +E Y S + G GHY+Q+VW + VGC
Sbjct: 97 VKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGC 136
>At4g33710.1 68417.m04787 pathogenesis-related protein, putative
similar to PR-1a protein [Nicotiana tabacum] GI:19944;
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 166
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPIT--GGHGTGHYSQLVWGETSHVGC 691
+ W E Y K T G GHY+Q+VW + VGC
Sbjct: 99 VRLWVREKSDYFHKSNTCRAGKQCGHYTQVVWKNSEWVGC 138
>At4g31470.1 68417.m04471 pathogenesis-related protein, putative
similar to pathogenesis related protein-1 from Zea mays
GI:3290004; contains Pfam profile PF00188: SCP-like
extracellular protein
Length = 185
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPITGGHGTG---HYSQLVWGETSHVGCGYXF 703
+ AW E+ KY + + G HY+QLVW ++S +GC F
Sbjct: 118 VAAWASEM-KYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISF 161
>At4g30320.1 68417.m04310 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 161
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 587 WFDEVGKYGSKPIT-GGHGTGHYSQLVWGETSHVGCGY 697
W E Y + + GHY+Q+VW T +GC +
Sbjct: 97 WLSEARSYNYRSNSCNSEMCGHYTQIVWKNTQKIGCAH 134
>At4g33730.1 68417.m04789 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 172
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 632 GHGTGHYSQLVWGETSHVGCG 694
G GHY+Q+VW ++ +GCG
Sbjct: 125 GPACGHYTQVVWRGSARLGCG 145
>At2g19970.1 68415.m02335 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1 {Arabidopsis
thaliana} GI:166805; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 177
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +2
Query: 485 ADSLXGQNLAATWATRPPTEPSD--SAPDFQKQINAWFDEVGKYGSKPITGGHGTGHYSQ 658
+D G+N+AA W +P D S P K W E Y GHY+Q
Sbjct: 85 SDGPYGENIAAGWV-----QPKDQMSGPIAAKY---WLTEKPNYDHATNKCKDVCGHYTQ 136
Query: 659 LVWGETSHVGCG 694
+V ++ +GCG
Sbjct: 137 MVANQSLSLGCG 148
>At4g33720.1 68417.m04788 pathogenesis-related protein, putative
similar to SP|P33154 Pathogenesis-related protein 1
precursor (PR-1) {Arabidopsis thaliana}; contains Pfam
profile PF00188: SCP-like extracellular protein
Length = 163
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKYG--SKPITGGHGTGHYSQLVWGETSHVGC 691
++ W DE Y S GHY+Q+VW + +GC
Sbjct: 96 VDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGC 135
>At1g50050.1 68414.m05616 pathogenesis-related protein, putative
similar to pathogenesis-related protein 1b precursor
(pr-1b) GB:X03465 GI:19977 from [Nicotiana tabacum];
contains Pfam profile PF00188: SCP-like extracellular
protein
Length = 226
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKYG--SKPITGGHGTGHYSQLVWGETSHVGC 691
+N W +E Y + G HY+Q+VW + +GC
Sbjct: 95 VNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSNSVKIGC 134
>At5g01450.1 68418.m00058 expressed protein
Length = 444
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -3
Query: 101 VIYETSNFFYYLNFPGIRCTM 39
V+Y+T+N +Y +FP +CT+
Sbjct: 255 VLYDTTNAYYNCSFPNDKCTL 275
>At5g66590.1 68418.m08394 allergen V5/Tpx-1-related family protein
contains similarity to SP|Q41495 STS14 protein precursor
{Solanum tuberosum}; contains Pfam profile PF00188:
SCP-like extracellular protein
Length = 185
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +2
Query: 578 INAWFDEVGKYGSKPIT--GGHGTGHYSQLVWGETSHVGC 691
+ W E Y K T H G Y Q+VW + +GC
Sbjct: 117 VETWVKEKPFYNYKSDTCAANHTCGVYKQVVWRNSKELGC 156
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,601,511
Number of Sequences: 28952
Number of extensions: 400513
Number of successful extensions: 1031
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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