Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H12
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   1.0  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   7.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.4  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   9.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.4  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 706 AARRYVRSRGGTRSTERWLRRHHRRP 629
           AARR   +R  T + + WL  H + P
Sbjct: 85  AARRKNATRESTATLKAWLNEHKKNP 110


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 200 VIPHPRVPQLPPRHIHL 250
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 200 VIPHPRVPQLPPRHIHL 250
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 200 VIPHPRVPQLPPRHIHL 250
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 65  RKRKEEADAANITIQSSRPHQ 3
           +KR    D    T  S+RPHQ
Sbjct: 166 KKRLRSCDLCQKTKSSNRPHQ 186


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 735 HAGHRPYRHRRRDGTC 688
           HAG +P++  + D TC
Sbjct: 253 HAGSKPFQCNKCDYTC 268


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 735 HAGHRPYRHRRRDGTC 688
           HAG +P++  + D TC
Sbjct: 11  HAGSKPFQCNKCDYTC 26


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 203 IPHPRVPQLPP 235
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 203 IPHPRVPQLPP 235
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,679
Number of Sequences: 336
Number of extensions: 4085
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)