Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H12
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 192 3e-51
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 192 3e-51
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 192 bits (469), Expect = 3e-51
Identities = 88/103 (85%), Positives = 97/103 (94%)
Frame = +2
Query: 275 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 454
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 455 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 583
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLG 103
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = +1
Query: 589 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFART 696
DK TQF RYF TSLCFVYPLDFART
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFART 141
Score = 42.7 bits (96), Expect(2) = 6e-09
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 738 YFGFYDTARGMLPDPKTHP 794
YFGFYDTARGMLPDPK P
Sbjct: 193 YFGFYDTARGMLPDPKKTP 211
Score = 29.1 bits (62), Expect(2) = 6e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 696 RLAADVGKGDGQREYFG 746
RLAADVGK G+RE+ G
Sbjct: 142 RLAADVGKAGGEREFTG 158
Score = 28.7 bits (61), Expect = 0.072
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +2
Query: 302 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 481
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 482 LSFWRGNFANVIRYFPTQALNFAFKD 559
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 362 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 520
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +2
Query: 779 P*NTPIVISWAIA--XTVXQSXVSFP 850
P TP +ISW IA T VS+P
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYP 232
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 192 bits (469), Expect = 3e-51
Identities = 88/103 (85%), Positives = 97/103 (94%)
Frame = +2
Query: 275 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 454
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 455 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 583
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLG
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLG 103
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/36 (61%), Positives = 22/36 (61%)
Frame = +1
Query: 589 DKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFART 696
DK TQF RYF TSLCFVYPLDFART
Sbjct: 106 DKNTQFLRYFVGNLASGGAAGATSLCFVYPLDFART 141
Score = 42.7 bits (96), Expect(2) = 6e-09
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 738 YFGFYDTARGMLPDPKTHP 794
YFGFYDTARGMLPDPK P
Sbjct: 193 YFGFYDTARGMLPDPKKTP 211
Score = 29.1 bits (62), Expect(2) = 6e-09
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 696 RLAADVGKGDGQREYFG 746
RLAADVGK G+RE+ G
Sbjct: 142 RLAADVGKAGGEREFTG 158
Score = 28.7 bits (61), Expect = 0.072
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +2
Query: 302 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 481
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 482 LSFWRGNFANVIRYFPTQALNFAFKD 559
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 362 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 520
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +2
Query: 779 P*NTPIVISWAIA--XTVXQSXVSFP 850
P TP +ISW IA T VS+P
Sbjct: 207 PKKTPFLISWGIAQVVTTVAGIVSYP 232
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,670
Number of Sequences: 438
Number of extensions: 5105
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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