Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H11
         (819 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0116 - 13022648-13022701,13022781-13022835,13023050-130231...    47   2e-05
01_01_0777 - 6017131-6017243,6018069-6018339,6018432-6018617,601...    31   1.1  
12_02_1261 + 27410921-27413401                                         29   4.4  
09_06_0347 + 22445962-22446154,22446495-22446616,22446764-224468...    29   5.9  
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062...    28   7.8  

>10_07_0116 -
           13022648-13022701,13022781-13022835,13023050-13023175,
           13023274-13023340,13024104-13024200,13024362-13024461,
           13024527-13024611,13024679-13024755,13024888-13024926,
           13025001-13025038,13025118-13025208,13025536-13025628,
           13025726-13025781,13025844-13025915,13026078-13026134,
           13026397-13026495,13026599-13026964
          Length = 523

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
 Frame = +3

Query: 351 ISEAVKITK--WELTEEGELVANNGSHEAVLYRSIPDSGVPQSEAMKMVPNA-KVGFSKA 521
           +S    ITK  W LT+E +     GS EA L  +IP  G  +    + + +   +G   A
Sbjct: 77  LSAPQDITKETWVLTDEAKGYVAGGSPEAQLVAAIPPEGASKDVLREKLGSVFDIGMKTA 136

Query: 522 MSSGWIYIDKSSGPPLVKRKVDSITDIVQENLSEIRKG 635
             + WI  +K +   LV RKV++I D +QE L  +  G
Sbjct: 137 AKNKWIGFEKGN-KDLVLRKVNTIKDDLQEQLKSLESG 173


>01_01_0777 -
           6017131-6017243,6018069-6018339,6018432-6018617,
           6018703-6018735,6018827-6018925,6019042-6019281,
           6019747-6020064,6020197-6020254,6020333-6020389,
           6020577-6020792,6020885-6021000
          Length = 568

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
 Frame = +3

Query: 213 MELNERILKYL--ENSDKADTL--KLCEEFNEEHQKIVGAV-KSLEALEMVISEAVKITK 377
           + LN  +LK +  ENSD    +   L ++ N++H+     + KSL+ +     E  + + 
Sbjct: 414 LRLNTAVLKNIIKENSDDRRVILNNLSQKMNQDHRFSTEVMEKSLQMMHQHFGEYNRCSA 473

Query: 378 WEL-TEEGELVANNGSHEAVLYRSIPDSGVPQSEAMKMVPNAKV 506
                E+ EL ANNG   A+ ++ +      Q       P AKV
Sbjct: 474 LNQDNEKNELKANNGHSMALEWKRVTIHMYSQRNKRPEAPLAKV 517


>12_02_1261 + 27410921-27413401
          Length = 826

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +3

Query: 414 NGSHEAVLYRSIPDSG--VPQSEAMKMVPNAKVGFSKAMSSGWIYIDKSSGPPLVKRK 581
           NG++ A    S+ D G    Q    KMVP A V  S   ++   + D +   P  K+K
Sbjct: 604 NGTNVAAASNSLKDEGQRADQPSLKKMVPGANVNHSSGEATNSAFPDIAYSTPKKKKK 661


>09_06_0347 +
           22445962-22446154,22446495-22446616,22446764-22446885,
           22447405-22447594,22447874-22448014,22448257-22448724,
           22448842-22449609,22450185-22450373
          Length = 730

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
 Frame = +3

Query: 192 YSGE-ELKMELNERILKYLENSDK-ADTL-KLCEEFNEEHQKIVGAVKSLEALEMVISEA 362
           Y GE + K E+  ++   +E  D+ A T  +L  +F E+ +KI+   K     + +I + 
Sbjct: 264 YFGELKQKNEIEVKLATTMEEVDRLARTADELAAKFQEQCEKILVLEKRSAHSDRIIKDL 323

Query: 363 VKITKWELTEEGELVANNGSHEAVLYRSIPDSGVPQSEAMKMVPN 497
           +      + E   +   NG   A+  R+IP + +  SE  +   N
Sbjct: 324 MLQRDKAVREAEAIRVKNGESTAIADRTIPITELSISEIKEATSN 368


>04_04_0294 +
           24204563-24204748,24205531-24205620,24205980-24206211,
           24207180-24207457,24207576-24207647,24208054-24208295,
           24208781-24209197,24209296-24209497,24209624-24209738,
           24209821-24209906,24210235-24210354,24210431-24210519,
           24210588-24210669,24211072-24211263,24211546-24211668
          Length = 841

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 216 ELNERILKYLENSDKADTLKLCEEFNEEHQKIV 314
           +L E I+ Y E+S   + LK C E+  +H K+V
Sbjct: 356 KLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLV 388


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,762,325
Number of Sequences: 37544
Number of extensions: 324489
Number of successful extensions: 835
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)