Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H11
         (819 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10782| Best HMM Match : No HMM Matches (HMM E-Value=.)              89   3e-18
SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1)                  47   2e-05
SB_13097| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.0  
SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10)                 30   2.0  
SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.4  
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)             29   6.0  
SB_41162| Best HMM Match : FbpA (HMM E-Value=0.043)                    29   6.0  
SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)             28   7.9  
SB_18820| Best HMM Match : FCH (HMM E-Value=5.4e-20)                   28   7.9  
SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.9  

>SB_10782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 399

 Score = 89.4 bits (212), Expect = 3e-18
 Identities = 58/167 (34%), Positives = 90/167 (53%), Gaps = 5/167 (2%)
 Frame = +3

Query: 315 GAVKSLEAL--EMVISEAVKITKWELTEEGELVANNGSHEAVLYRSIPDSGVPQSEAMKM 488
           GA  +L  +   ++ +E  ++    LT+EG  +A NGSHEA ++ +IP+ G+PQS    +
Sbjct: 6   GAAANLAGVGSRLINTEQRQVQSLVLTDEGNQIAENGSHEAWVFDAIPEGGMPQSNIKSL 65

Query: 489 VPNAKVGFSKAMSSGWIYIDK-SSGPPLVKRKVDSITDIVQENLSEI-RKGIDNLSENVR 662
             +A +GFSKAMSSGW+ IDK + G P V +KV+ I D VQ  L ++     +++ E   
Sbjct: 66  GEHANIGFSKAMSSGWLRIDKQAEGGPRVFKKVEKIDDSVQLMLLKVLNHDYNDIPEAKI 125

Query: 663 NDYKKGNFYKR*PLKASCCRRAPNLRY-X*RXXNRXTSDMLLSGSXK 800
            + KK        +K+    +         R     T+DMLLSGS +
Sbjct: 126 KELKKRKLVTTQVIKSFYVTKGKAFSLSVQRLEADLTADMLLSGSWR 172


>SB_33952| Best HMM Match : Lectin_C (HMM E-Value=3.1)
          Length = 311

 Score = 47.2 bits (107), Expect = 2e-05
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
 Frame = +3

Query: 249 NSDKADTLKLCEEFNEEHQ--KIV-GAVKSLEALEMVISEAVKITKWELTEEGELVANNG 419
           NS   ++L+   + N+ H   KI  G V    + E++ +E  ++    LT+EG  +A NG
Sbjct: 231 NSLGWESLEQRRQLNQAHMFYKIYHGLVGISFSPELINTEQRQVQSLVLTDEGNQIAENG 290

Query: 420 SHEAVLYRSIPDSGVPQS 473
           SHEA ++ +IP+ G+PQS
Sbjct: 291 SHEAWVFDAIPEGGMPQS 308


>SB_13097| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 607

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = -3

Query: 361 ASEITISRASKLFTAPTIF*CSSLNSSHNFKVSALSLFSRYFKILSFNSILSSSP 197
           +S+ITI+RAS LF+  ++   SSL   HN  +  +S  S  F I       +S P
Sbjct: 182 SSDITITRASNLFSTSSVPQNSSL--GHNTSLVTISRASNTFSISGIPQSSASGP 234


>SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10)
          Length = 1318

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 22/82 (26%), Positives = 40/82 (48%)
 Frame = +3

Query: 189 KYSGEELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEALEMVISEAVK 368
           +Y+  + KMELNE I+ Y   +      K CE   +E ++I+  +    +   ++  A++
Sbjct: 157 RYTFNKQKMELNESIVTYA--ARMRYQAKKCEFGTQEDERILEHLNQTISDGDLVKRAIE 214

Query: 369 ITKWELTEEGELVANNGSHEAV 434
             +W LT   E + N G  E +
Sbjct: 215 -KRWNLT---EFIENAGQKEKI 232


>SB_46088| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3306

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
 Frame = +3

Query: 216  ELNERILKYLENSDKADT-LKLCEEFNEEHQKIVGAVKSLE-ALEMV--ISEAVKITKWE 383
            +LN   LK +   D+ D  +K+C+EF   H+++VG +  +E  +E +  +SE V  T+ +
Sbjct: 1855 DLNAGKLKRVR--DRVDQQVKMCDEFAPLHEEVVGWLAEMEPVVENMRPVSEDVHATRQQ 1912

Query: 384  LTE 392
            L E
Sbjct: 1913 LQE 1915


>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
          Length = 712

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
 Frame = +3

Query: 183 KLKYSGEELKME---LNERILKYLENSDKADTLKLCEEFNE-EHQKIVGAVKSLEALEMV 350
           K K S +E K E   + E+ L+YLE S +   L+ CE  N+ +H K+V      + LEM 
Sbjct: 580 KYKESLKEAKAENRAMREK-LQYLEKSSEEADLQACEIENQLKHAKMVIQQLKDQELEMA 638

Query: 351 --ISEAVKITKWELTEEGELVANNGSHE 428
             I E  +  +    +   L  NN S E
Sbjct: 639 KQIDELEQHIETLKQQNNSLQRNNSSFE 666


>SB_41162| Best HMM Match : FbpA (HMM E-Value=0.043)
          Length = 949

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
 Frame = +3

Query: 300 HQKIVGAVKSLEALEMVISEAVKITKWELTEEGELVANNGSHEAVLYRSIPDSGVPQSEA 479
           H    GA  S++    ++SEA  +  +++   GE++A+N S   V   ++   G  +   
Sbjct: 500 HALTCGARDSVQKALRILSEATTLPDFQMIWLGEIIASNNSAREVELTTLRGPGDEEFSP 559

Query: 480 MKMVPNAKVGFSKAMSSGWIYIDKSSGPPLVKRKVDSITDIVQENLSE-IRKGID 641
               P +    S        +  +   P ++  K  ++TD   E L E +R G++
Sbjct: 560 PPSPPRSSTNQSARSRHVASWSSRDLRPAVMTPK-SNVTDANIECLIEKMRSGLE 613


>SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)
          Length = 891

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 9/33 (27%), Positives = 22/33 (66%)
 Frame = +3

Query: 579 KVDSITDIVQENLSEIRKGIDNLSENVRNDYKK 677
           ++DS+   + E++ ++ K + NLS  V +++K+
Sbjct: 193 QIDSLKFEISESIKDVAKQVSNLSNKVTSEFKR 225


>SB_18820| Best HMM Match : FCH (HMM E-Value=5.4e-20)
          Length = 477

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +3

Query: 537 IYIDKSSGPPLVKRKVDSITDIVQENLSEIRKGIDNLSENVRNDYKKGNFYKR 695
           + I+ SS P + + K   +TD V++   +++K  D  ++ + N  K    Y+R
Sbjct: 174 LQIEASSDPNVPQEKFKKLTDAVEKARRDMQKCEDKYNDRLENISKDNPRYER 226


>SB_4758| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 788

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 255 DKADTLKLCEEFNEEHQKIVGAVKSLEALEMVISEAVKI 371
           DK+D  K    FNE ++K++G  K  EA  + I E V++
Sbjct: 203 DKSDYPKSSTYFNETNKKVIGKFKD-EAAGIAICEFVRL 240


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,254,624
Number of Sequences: 59808
Number of extensions: 392639
Number of successful extensions: 1303
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2287608719
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)