Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H11
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl ... 100 1e-21
AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl ... 100 1e-21
Z70284-7|CAA94284.2| 284|Caenorhabditis elegans Hypothetical pr... 35 0.061
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 33 0.32
U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 31 1.3
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF068713-10|AAC17801.1| 376|Caenorhabditis elegans Serpentine r... 29 4.0
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z92817-6|CAB60324.1| 384|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z83111-7|CAB05534.2| 384|Caenorhabditis elegans Hypothetical pr... 28 9.2
>AF000263-6|AAO21394.1| 496|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform b protein.
Length = 496
Score = 100 bits (240), Expect = 1e-21
Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
Frame = +3
Query: 219 LNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEALEMVI-SEAVKITKWELTEE 395
L ++IL +L+ S++ ++++L +++N +HQK++GA+KSL A E V+ ++ V + ELT E
Sbjct: 13 LPQQILDFLQESNEFNSIQLAQQWNLDHQKVIGAIKSLLANEGVLTTKDVTEKRLELTNE 72
Query: 396 GELVANNGSHEAVLYRSIPDSGVPQSEAMKMVPNAKVGFSKAMSSGWIYIDKSSGPPLVK 575
G AN GS E +++ + G Q++ K P K+G +KAM W+ +DK V
Sbjct: 73 GVQFANEGSPEYLVFEFVGTDGAAQADIQKK-PFGKIGMAKAMQFKWVSVDKGR----VV 127
Query: 576 RKVDSITDIVQENLSEIRKGIDNLSENVRNDYKKGNFYKR*PLKASCCRRAPNL-RYX*R 752
R+ +TD ++ L +R G ++SEN + + KK +KA + + +
Sbjct: 128 RQATEVTDSTRKQLESLRIGSSDVSENEKKELKKRKLISEVNIKALVVSKGTSFTTSLAK 187
Query: 753 XXNRXTSDMLLSGSXK 800
T +M+ SGS K
Sbjct: 188 QEADLTPEMIASGSWK 203
>AF000263-5|AAG00015.1| 552|Caenorhabditis elegans Phenylalanyl (f)
trna synthetaseprotein 1, isoform a protein.
Length = 552
Score = 100 bits (240), Expect = 1e-21
Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
Frame = +3
Query: 219 LNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEALEMVI-SEAVKITKWELTEE 395
L ++IL +L+ S++ ++++L +++N +HQK++GA+KSL A E V+ ++ V + ELT E
Sbjct: 69 LPQQILDFLQESNEFNSIQLAQQWNLDHQKVIGAIKSLLANEGVLTTKDVTEKRLELTNE 128
Query: 396 GELVANNGSHEAVLYRSIPDSGVPQSEAMKMVPNAKVGFSKAMSSGWIYIDKSSGPPLVK 575
G AN GS E +++ + G Q++ K P K+G +KAM W+ +DK V
Sbjct: 129 GVQFANEGSPEYLVFEFVGTDGAAQADIQKK-PFGKIGMAKAMQFKWVSVDKGR----VV 183
Query: 576 RKVDSITDIVQENLSEIRKGIDNLSENVRNDYKKGNFYKR*PLKASCCRRAPNL-RYX*R 752
R+ +TD ++ L +R G ++SEN + + KK +KA + + +
Sbjct: 184 RQATEVTDSTRKQLESLRIGSSDVSENEKKELKKRKLISEVNIKALVVSKGTSFTTSLAK 243
Query: 753 XXNRXTSDMLLSGSXK 800
T +M+ SGS K
Sbjct: 244 QEADLTPEMIASGSWK 259
>Z70284-7|CAA94284.2| 284|Caenorhabditis elegans Hypothetical
protein K07F5.8 protein.
Length = 284
Score = 35.1 bits (77), Expect = 0.061
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Frame = +3
Query: 237 KYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEALEMVISEAVKITKWELTEEGELVANN 416
+YL D DT+ F E+ QK+ +S +A++ + A K+TK LT EG A
Sbjct: 102 EYLPTEDNKDTMS----FKEKGQKVTVKFESSKAIKFRDNSAAKVTKTVLTVEG---AGC 154
Query: 417 GSHEAVLYRSI--PDSGVPQSE--AMKMVPNAKVGFSKAMSSGWIYIDKSSGPPLVKRKV 584
+ Y I PD GVP ++ ++++ A+V I ++ +++ +
Sbjct: 155 DKLKVNHYHWIDWPDRGVPTADNAILELLEKARVSKGPIAVHCSAGIGRTGSVVMLEYVM 214
Query: 585 DSIT--DIVQENLSEIRKGIDNLSENVRNDYK 674
D + I+++ I+K + + +V+ D++
Sbjct: 215 DQLLAGQIIEDTDKIIQKIREQRNNSVQTDHQ 246
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 32.7 bits (71), Expect = 0.32
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Frame = +3
Query: 201 EELKMELNERILKYLENSDKADTL--KLCEEFNE-------EHQKIVGAVKSLEALEMVI 353
EELK ++ I+K E + D L KL ++ +E EH+K + +K A E I
Sbjct: 249 EELKKSVSSEIVKATEAAHATDQLRKKLQKQQDEHEKRVEQEHKKEIEDLKGALAAEKRI 308
Query: 354 SEAVKITKWELTEE 395
SEA K+ +LTEE
Sbjct: 309 SEADKVELKKLTEE 322
>U50068-7|AAB37735.1| 479|Caenorhabditis elegans Hypothetical
protein C01G5.3 protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/139 (19%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Frame = +3
Query: 210 KMELNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEALEMVISEAVKITKWELT 389
+M+ R L+ + K+D LK+ ++ EE+ + + K L + + + ++ + L
Sbjct: 303 RMDGETRKESKLDENRKSDRLKIEDKKPEEYVYLKASKKKLYTMSISVDVKPRLFQESLF 362
Query: 390 EEGELVANNGSHEAVLY-----RSIPDSGVPQSEAMKMVPNAKV---GFSKAMSSGWIYI 545
+ E++ ++ E+ + I +S P+++ + P V K ++ + +
Sbjct: 363 KFPEIIISSIKLESTKFVKDEKVGIIESPTPKADPAENTPTQAVEPINIEKEVNESEVVV 422
Query: 546 DKSSGPPLVKRKVDSITDI 602
+K +V+ K D I DI
Sbjct: 423 EKKETDVVVENKNDEIQDI 441
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 183 KLKYSGEELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEAL 341
KL EL E++E K + D +++ C + N +H+K + KSL+ +
Sbjct: 203 KLSSDNTELLFEMSELEYKVADVRDSLGSIRECLKLNPDHKKCYTSYKSLKKI 255
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = -3
Query: 565 GGPLDLSMYIHPDDMALLNPTFAFGTIFIASDCGTPL-SGILLYNTASWLPLLATSSPSS 389
G P + I + LNP + G DCGT L + Y+ S P + + +
Sbjct: 185 GDPEKSCVTIWVTSLLKLNPGYVQGQFDDIWDCGTNLATPTCRYDPTSTAPHIKYDTSYT 244
Query: 388 VNSHFVILTASEITISRASKLFTAPT 311
S + T S +T ++ + T PT
Sbjct: 245 CASTTTVSTTSTVTTTKPTTTTTTPT 270
>Z70270-3|CAA94227.1| 153|Caenorhabditis elegans Hypothetical
protein C53D6.5 protein.
Length = 153
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 147 KLELSFEIL*PKKLKYSGEELKMELNE---RILKYLENSDKADTLKLCEEFNEEHQKIV 314
KLE+ ++ PK K + +ELK + E RI KY+E SD D LK ++ QKIV
Sbjct: 90 KLEIEQKLKDPKLDKATSDELKKQWQERINRIKKYIEASD--DKLK---GYDNHTQKIV 143
>AF068713-10|AAC17801.1| 376|Caenorhabditis elegans Serpentine
receptor, class w protein130 protein.
Length = 376
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 379 HFVILTASEITISRASKLFTAPTIF*CSSLNSSHNFKVSALSLFSRYFKILSFNS 215
HF+ILT I S + + TA I L+ +NFK S L +K + NS
Sbjct: 57 HFIILTRKPIRTSSVNIIMTAIAI--VEILSLFYNFKTSILYWLRTNYKCFNSNS 109
>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical protein
F14E5.2b protein.
Length = 1147
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 546 DKSSGPPLVKRKVDSITDIVQENLSEIRKGIDNLSENVRNDYKKG 680
D PPL +I D + E DN+ E ++ND+ KG
Sbjct: 962 DPQLDPPLYNACKSTINDHCSATIMESGGHFDNVMECLKNDFNKG 1006
>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical protein
F14E5.2a protein.
Length = 1149
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 546 DKSSGPPLVKRKVDSITDIVQENLSEIRKGIDNLSENVRNDYKKG 680
D PPL +I D + E DN+ E ++ND+ KG
Sbjct: 964 DPQLDPPLYNACKSTINDHCSATIMESGGHFDNVMECLKNDFNKG 1008
>Z92817-6|CAB60324.1| 384|Caenorhabditis elegans Hypothetical
protein F57G8.6 protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +3
Query: 150 LELSFEIL*PKKLKYSGEELKMELNERILKYLENSDKADTLKLCEEFNE-------EHQ- 305
L+L ++ ++L+ S E L + Y + D LK+CE+F E EH
Sbjct: 267 LDLQPQVQELQELEVSDVEFNFMLAQLTFSYAGKRLQGDILKICEKFQEVLSNDLHEHYV 326
Query: 306 KIVGAVKSLEALE--MVISEAVKITKWELTEEGELVA 410
K +G + L M I+ A++ W GEL A
Sbjct: 327 KELGMQRYSGRLSKIMKINNAIQNDIWSNRPRGELAA 363
>Z83111-7|CAB05534.2| 384|Caenorhabditis elegans Hypothetical
protein F57G8.6 protein.
Length = 384
Score = 27.9 bits (59), Expect = 9.2
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Frame = +3
Query: 150 LELSFEIL*PKKLKYSGEELKMELNERILKYLENSDKADTLKLCEEFNE-------EHQ- 305
L+L ++ ++L+ S E L + Y + D LK+CE+F E EH
Sbjct: 267 LDLQPQVQELQELEVSDVEFNFMLAQLTFSYAGKRLQGDILKICEKFQEVLSNDLHEHYV 326
Query: 306 KIVGAVKSLEALE--MVISEAVKITKWELTEEGELVA 410
K +G + L M I+ A++ W GEL A
Sbjct: 327 KELGMQRYSGRLSKIMKINNAIQNDIWSNRPRGELAA 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,151,510
Number of Sequences: 27780
Number of extensions: 314522
Number of successful extensions: 1018
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -