Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H10
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   111   3e-26
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    32   0.025
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    26   1.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.9  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  111 bits (267), Expect = 3e-26
 Identities = 53/61 (86%), Positives = 57/61 (93%)
 Frame = +2

Query: 512 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDL 691
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK   GERNVLIFDL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 692 G 694
           G
Sbjct: 61  G 61



 Score = 32.3 bits (70), Expect = 0.019
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 693 GGGTFDVSILTIEDG 737
           GGGTFDVSILTI++G
Sbjct: 61  GGGTFDVSILTIDEG 75


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 31.9 bits (69), Expect = 0.025
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 202 WSCXPWSLAMISTFPCWKTPTQEYVVPRSIPTAGAFA 92
           W C  WS+A   T  C +T   E V+ RS P++   A
Sbjct: 21  WDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLA 57


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +1

Query: 628 CDCLRS*QKGYWRTKCTYL*PRXAVPSTCPS---LPSRMVSSR*NPPPAT 768
           C+ L    + YWR     + P  +VP   PS    PS     R  PPP T
Sbjct: 410 CNHLAEYLEAYWRATHPPVRPTPSVPRPLPSQEASPSGEQPGRMGPPPPT 459


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 89   NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPGXTGPLRLMLRS 223
            +GK  RS +   +++LL    P REG  H+  Q PG  G +R+ + +
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG--GAVRVTIEN 1846


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,864
Number of Sequences: 2352
Number of extensions: 17716
Number of successful extensions: 33
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)