Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H07
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.20 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.2  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   7.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = -1

Query: 236 FVVYQKNILFC**TTFIHIHLYR*AQYYFDNI*YLWRKCYCTFFGLFILF 87
           F+++  ++LFC    F ++HL       +  +  L+  C   F+  FI+F
Sbjct: 173 FIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIF 222


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 595 HCPVGYQ*ARXGRYSEAC 648
           HCP GY     G Y + C
Sbjct: 86  HCPYGYTGKDCGEYVDWC 103


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 118 IALFLVYLYYFIAVVYKY 65
           IA FL+ LYY  +  Y Y
Sbjct: 6   IACFLLLLYYIYSKHYSY 23


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 176 LYR*AQYYFDNI*YLWRKCYCTFFGLFIL 90
           + R  +Y+F     LW + + TF G+ +L
Sbjct: 83  IVRFMKYHFFGTLKLWSQLFSTFAGIEVL 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,756
Number of Sequences: 336
Number of extensions: 3920
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)