Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H07
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0019 - 129767-129931,130078-130257,130491-130728,130833-13...    29   3.7  
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233...    29   4.9  
07_01_0008 - 56178-57095                                               28   8.6  
06_03_1152 + 28044667-28045239,28045330-28045750,28045940-28046298     28   8.6  

>05_01_0019 -
           129767-129931,130078-130257,130491-130728,130833-131236,
           131284-131427,131709-131995,132071-132150,132563-132714,
           132793-132909,133292-133450,133546-133946,134106-134423,
           135050-135095,135203-135310
          Length = 932

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +1

Query: 301 HK*TKNV*TNPRVYKRDETGASHAGDPGVYEGQIYR 408
           HK +K+V  +P + K    GA+HAGDP    GQ ++
Sbjct: 50  HKGSKSVFASP-LEKIQPNGANHAGDPETPGGQAFK 84


>02_05_0181 -
           26522849-26522932,26523053-26523184,26523263-26523329,
           26523800-26524186,26524259-26524360,26524983-26525132,
           26525552-26525636,26525743-26525769,26525858-26526116,
           26526659-26526751,26526921-26527013,26527122-26527289,
           26527436-26527594,26528214-26528273,26528392-26528487
          Length = 653

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = -2

Query: 325 FRHFLFICDTCLCFWLLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTFTCIDRHNTILI 146
           F H L I D  L F+L ++T +T   + P LS     + FV+      FT I  H+    
Sbjct: 544 FLHLLLIRDCPLPFYLWHLTQFTKKGSDP-LS-----FKFVEHHKTQAFTFISSHDE--S 595

Query: 145 IFNIYGE 125
           ++N+ GE
Sbjct: 596 VWNLDGE 602


>07_01_0008 - 56178-57095
          Length = 305

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 391 HTLRDLPRERPRSHPVYILLGLFRHFLFICDTCLCFWLLYI 269
           H L   P  RP+ HP +    L   F   C   L F+LL++
Sbjct: 214 HLLTTPPPHRPQPHPHHYYPWLSLLFAAACGAMLTFFLLFV 254


>06_03_1152 + 28044667-28045239,28045330-28045750,28045940-28046298
          Length = 450

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 8/35 (22%), Positives = 21/35 (60%)
 Frame = -3

Query: 378 ISRVRGPGLIPFIYSWVCSDIFCLFVILAYVSGYF 274
           +  V   G+ PF+ +++C+ +F +++ +   + YF
Sbjct: 46  VQSVVDEGVSPFLITYICNSLFVIYIPIVEAARYF 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,617,937
Number of Sequences: 37544
Number of extensions: 325531
Number of successful extensions: 616
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)