Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H07
         (881 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   7.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   7.1  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   7.1  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 273 TSLYTHRIRMDLFCRVPKK 217
           T  Y + IRM+L C +P++
Sbjct: 850 TVAYLYHIRMELICPIPEE 868


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 13/62 (20%), Positives = 31/62 (50%)
 Frame = +2

Query: 35   TGRRQNN*IIILIHYRDKII*INQKKCNSIFAINIKYYQNSIVPIYTSECV*RSFINKII 214
            T ++ +  I++ I +    + ++  K +  F+  + Y     + I++SEC+ + F  +  
Sbjct: 1621 TNKKFDMIIMLFIGFNMLTMTLDHYKQSETFSAVLDYLNMIFICIFSSECLMKIFALRYH 1680

Query: 215  YF 220
            YF
Sbjct: 1681 YF 1682


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 337 LLGLFRHFLFICDTCLCFWLLYITLYTPDSNGPFLSCTKKIYY 209
           L+ L  H+L +  +  CF  +Y+ +Y   +N     CT K+ Y
Sbjct: 254 LIALLLHYLHLSTSIWCFIYIYV-IYDLIAN----ECTPKLKY 291


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,322
Number of Sequences: 2352
Number of extensions: 14655
Number of successful extensions: 87
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)