Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H07
(881 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF399637-1|AAK95122.1| 216|Homo sapiens olfactory receptor prot... 35 0.45
AB065851-1|BAC06069.1| 314|Homo sapiens seven transmembrane hel... 35 0.45
AB083038-1|BAB91014.1| 309|Homo sapiens retinal short chain deh... 34 0.78
BC064525-1|AAH64525.1| 309|Homo sapiens epidermal retinal dehyd... 33 1.0
BC037219-1|AAH37219.2| 309|Homo sapiens epidermal retinal dehyd... 33 1.0
BC036001-1|AAH36001.1| 300|Homo sapiens hydroxysteroid (17-beta... 33 1.0
BC021673-1|AAH21673.1| 300|Homo sapiens hydroxysteroid (17-beta... 33 1.0
BC016367-1|AAH16367.1| 300|Homo sapiens hydroxysteroid (17-beta... 33 1.0
BC014327-1|AAH14327.1| 300|Homo sapiens hydroxysteroid (17-beta... 33 1.0
BC008650-1|AAH08650.1| 300|Homo sapiens HSD17B11 protein protein. 33 1.0
AY444559-1|AAS68535.1| 265|Homo sapiens retinal short chain deh... 33 1.0
AY358553-1|AAQ88917.1| 300|Homo sapiens KFLL207 protein. 33 1.0
AK075348-1|BAC11560.1| 300|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK057667-1|BAB71545.1| 231|Homo sapiens protein ( Homo sapiens ... 33 1.0
AF273056-1|AAM44459.1| 300|Homo sapiens CTCL tumor antigen HD-C... 33 1.0
AF126780-1|AAF06939.1| 300|Homo sapiens retinal short-chain deh... 33 1.0
AB065845-1|BAC06063.1| 312|Homo sapiens seven transmembrane hel... 33 1.0
AB065784-1|BAC06004.1| 175|Homo sapiens seven transmembrane hel... 33 1.0
AB065657-1|BAC05883.1| 312|Homo sapiens seven transmembrane hel... 33 1.0
AB065639-1|BAC05865.1| 251|Homo sapiens seven transmembrane hel... 33 1.4
AL513205-6|CAH73791.1| 319|Homo sapiens olfactory receptor, fam... 32 3.2
AB065650-1|BAC05876.1| 319|Homo sapiens seven transmembrane hel... 32 3.2
AY358215-1|AAQ88582.1| 308|Homo sapiens VNFT9373 protein. 31 4.2
AL513205-8|CAH73793.1| 317|Homo sapiens olfactory receptor, fam... 31 4.2
AL359512-1|CAI94957.1| 316|Homo sapiens olfactory receptor, fam... 31 4.2
AF399622-1|AAK95107.1| 216|Homo sapiens olfactory receptor prot... 31 4.2
AB065775-1|BAC05995.1| 312|Homo sapiens seven transmembrane hel... 31 4.2
AB065726-1|BAC05947.1| 316|Homo sapiens seven transmembrane hel... 31 4.2
AB065630-1|BAC05856.1| 317|Homo sapiens seven transmembrane hel... 31 4.2
AB065628-1|BAC05854.1| 212|Homo sapiens seven transmembrane hel... 31 4.2
AB065840-1|BAC06059.1| 312|Homo sapiens seven transmembrane hel... 31 7.3
AB065757-1|BAC05977.1| 311|Homo sapiens seven transmembrane hel... 31 7.3
AB065658-1|BAC05884.1| 312|Homo sapiens seven transmembrane hel... 31 7.3
AF399608-1|AAK95093.1| 216|Homo sapiens olfactory receptor prot... 30 9.7
AB065849-1|BAC06067.1| 314|Homo sapiens seven transmembrane hel... 30 9.7
>AF399637-1|AAK95122.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 34.7 bits (76), Expect = 0.45
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLV----YLYYFIAVV 74
++F D PL T +C D + + ++IF + G N + LV YL+ FI ++
Sbjct: 109 HFFCDAPPLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFITIM 159
>AB065851-1|BAC06069.1| 314|Homo sapiens seven transmembrane helix
receptor protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.45
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLV----YLYYFIAVV 74
++F D PL T +C D + + ++IF + G N + LV YL+ FI ++
Sbjct: 174 HFFCDAPPLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFITIM 224
>AB083038-1|BAB91014.1| 309|Homo sapiens retinal short chain
dehydrogenase reductase protein.
Length = 309
Score = 33.9 bits (74), Expect = 0.78
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVGG*MLR 676
+VLWDINK+G E+T K+ + G +R
Sbjct: 67 LVLWDINKEGNEETCKMAREAGATRVR 93
>BC064525-1|AAH64525.1| 309|Homo sapiens epidermal retinal
dehydrogenase 2 protein.
Length = 309
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK+G E+T K+ + G
Sbjct: 67 LVLWDINKEGNEETCKMAREAG 88
>BC037219-1|AAH37219.2| 309|Homo sapiens epidermal retinal
dehydrogenase 2 protein.
Length = 309
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK+G E+T K+ + G
Sbjct: 67 LVLWDINKEGNEETCKMAREAG 88
>BC036001-1|AAH36001.1| 300|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 11 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>BC021673-1|AAH21673.1| 300|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 11 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>BC016367-1|AAH16367.1| 300|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 11 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>BC014327-1|AAH14327.1| 300|Homo sapiens hydroxysteroid (17-beta)
dehydrogenase 11 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>BC008650-1|AAH08650.1| 300|Homo sapiens HSD17B11 protein protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>AY444559-1|AAS68535.1| 265|Homo sapiens retinal short chain
dehydrogenase reductase isoform 1 protein.
Length = 265
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK+G E+T K+ + G
Sbjct: 67 LVLWDINKEGNEETCKMAREAG 88
>AY358553-1|AAQ88917.1| 300|Homo sapiens KFLL207 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>AK075348-1|BAC11560.1| 300|Homo sapiens protein ( Homo sapiens
cDNA PSEC0029 fis, clone NT2RP1000544, highly similar to
Retinal short-chain dehydrogenase/reductase 2. ).
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>AK057667-1|BAB71545.1| 231|Homo sapiens protein ( Homo sapiens
cDNA FLJ33105 fis, clone TRACH2000926, weakly similar to
PROBABLE OXIDOREDUCTASE EPHD (EC 1.-.-.-). ).
Length = 231
Score = 33.5 bits (73), Expect = 1.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK+G E+T K+ + G
Sbjct: 67 LVLWDINKEGNEETCKMAREAG 88
>AF273056-1|AAM44459.1| 300|Homo sapiens CTCL tumor antigen
HD-CL-03 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>AF126780-1|AAF06939.1| 300|Homo sapiens retinal short-chain
dehydrogenase/reductase retSDR2 protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
+VLWDINK G E+T KG+G
Sbjct: 63 LVLWDINKHGLEETAAKCKGLG 84
>AB065845-1|BAC06063.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGEN-AIALFLVYL-YYFIA-VVYKYNN 59
++F D P+ +C D +NT ++IF I G ++LF + Y FI + K N+
Sbjct: 176 HFFCDTSPILALSCTDTYNTEILIFIIVGSTLMVSLFTISASYVFILFTILKINS 230
>AB065784-1|BAC06004.1| 175|Homo sapiens seven transmembrane helix
receptor protein.
Length = 175
Score = 33.5 bits (73), Expect = 1.0
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -2
Query: 229 CTKKI-YYFVDKRPLYTFTCID--RHNTILIIFNIYGENAIALFLVYLYYFI 83
C++ I ++F D PL++ +C D H+ IL++F + E L ++ Y FI
Sbjct: 34 CSRDINHFFCDISPLFSLSCTDTYMHDIILVVFASFVEAICLLSVLLSYVFI 85
>AB065657-1|BAC05883.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGEN-AIALFLVYL-YYFIA-VVYKYNN 59
++F D P+ +C D +NT ++IF I G ++LF + Y FI + K N+
Sbjct: 176 HFFCDTSPILALSCTDTYNTEILIFIIVGSTLMVSLFTISASYVFILFTILKINS 230
>AB065639-1|BAC05865.1| 251|Homo sapiens seven transmembrane helix
receptor protein.
Length = 251
Score = 33.1 bits (72), Expect = 1.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 241 PFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVVYKYN 62
PF K +YF D P+ C D + + L+IF I+G L LV FI + Y +
Sbjct: 165 PFCGSNKVNHYFCDISPVIRLACADSYISELVIF-IFG----VLVLVVPLIFICISYGFI 219
Query: 61 NLVVL-APAGVGAQ 23
+L P+ G Q
Sbjct: 220 VRTILKIPSAEGKQ 233
>AL513205-6|CAH73791.1| 319|Homo sapiens olfactory receptor, family
6, subfamily K, member18491) protein.
Length = 319
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -2
Query: 298 TCLCFWLLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENA 119
+C C +LL + S PF + F D P+ + C D ++I+ I+
Sbjct: 152 SCFCGFLLVLPEIAWISTLPFCGSNQIHQIFCDFTPVLSLACTDTF-LVVIVDAIHAAEI 210
Query: 118 IALFLVYLYYFIAVV 74
+A FLV +I ++
Sbjct: 211 VASFLVIALSYIRII 225
>AB065650-1|BAC05876.1| 319|Homo sapiens seven transmembrane helix
receptor protein.
Length = 319
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -2
Query: 298 TCLCFWLLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENA 119
+C C +LL + S PF + F D P+ + C D ++I+ I+
Sbjct: 152 SCFCGFLLVLPEIAWISTLPFCGSNQIHQIFCDFTPVLSLACTDTF-LVVIVDAIHAAEI 210
Query: 118 IALFLVYLYYFIAVV 74
+A FLV +I ++
Sbjct: 211 VASFLVIALSYIRII 225
>AY358215-1|AAQ88582.1| 308|Homo sapiens VNFT9373 protein.
Length = 308
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -2
Query: 241 PFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVV 74
PF + +F D PL + +C D L++ + G ++ FL+ L +I ++
Sbjct: 165 PFCGSNEINDFFCDVPPLLSLSCSDTFINQLVLLGLCGSIIVSTFLIVLVSYIYII 220
>AL513205-8|CAH73793.1| 317|Homo sapiens olfactory receptor, family
6, subfamily N, memberactor 7 (keratinocyte growth f
protein.
Length = 317
Score = 31.5 bits (68), Expect = 4.2
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = -2
Query: 364 RPRSHPVYILLGLFRHFLFICDTCLCFWLLYITLYTPDSNGPFLSCTKKIYYFVDKRPLY 185
RP +P+ + L C TC +L I+ S PF + + + F D PL
Sbjct: 128 RPLHYPIIMTTTLCAKMAAACWTC--GFLCPISEVILASQLPFCAYNEIQHIFCDFPPLL 185
Query: 184 TFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIA 80
+ C D IL+ F I NA + + + + I+
Sbjct: 186 SLACKDTSANILVDFAI---NAFIILITFFFIMIS 217
>AL359512-1|CAI94957.1| 316|Homo sapiens olfactory receptor, family
1, subfamily K, memberene protein.
Length = 316
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 280 LLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLV 101
LLYI L S F + + ++F D +PL +C D H+ L+IF + FL+
Sbjct: 158 LLYILLMARLS---FCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVTPFLL 214
Query: 100 YLYYFIAV 77
L + A+
Sbjct: 215 ILASYGAI 222
>AF399622-1|AAK95107.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 280 LLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLV 101
LLYI L S F + + ++F D +PL +C D H+ L+IF + FL+
Sbjct: 90 LLYILLMARLS---FCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVTPFLL 146
Query: 100 YLYYFIAV 77
L + A+
Sbjct: 147 ILASYGAI 154
>AB065775-1|BAC05995.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 31.5 bits (68), Expect = 4.2
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 241 PFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVVY 71
PF + +YF D PL C + H L++ G A+ F+V L ++ ++Y
Sbjct: 165 PFCGPNEIDHYFCDVYPLLKLACSNIHMIGLLVIANSGLIALVTFVVLLLSYVFILY 221
>AB065726-1|BAC05947.1| 316|Homo sapiens seven transmembrane helix
receptor protein.
Length = 316
Score = 31.5 bits (68), Expect = 4.2
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -2
Query: 280 LLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLV 101
LLYI L S F + + ++F D +PL +C D H+ L+IF + FL+
Sbjct: 158 LLYILLMARLS---FCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVTPFLL 214
Query: 100 YLYYFIAV 77
L + A+
Sbjct: 215 ILASYGAI 222
>AB065630-1|BAC05856.1| 317|Homo sapiens seven transmembrane helix
receptor protein.
Length = 317
Score = 31.5 bits (68), Expect = 4.2
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = -2
Query: 364 RPRSHPVYILLGLFRHFLFICDTCLCFWLLYITLYTPDSNGPFLSCTKKIYYFVDKRPLY 185
RP +P+ + L C TC +L I+ S PF + + + F D PL
Sbjct: 128 RPLHYPIIMTTTLCAKMAAACWTC--GFLCPISEVILASQLPFCAYNEIQHIFCDFPPLL 185
Query: 184 TFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIA 80
+ C D IL+ F I NA + + + + I+
Sbjct: 186 SLACKDTSANILVDFAI---NAFIILITFFFIMIS 217
>AB065628-1|BAC05854.1| 212|Homo sapiens seven transmembrane helix
receptor protein.
Length = 212
Score = 31.5 bits (68), Expect = 4.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = -2
Query: 241 PFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVV 74
PF + +F D PL + +C D L++ + G ++ FL+ L +I ++
Sbjct: 145 PFCGSNEINDFFCDVPPLLSLSCSDTFINQLVLLGLCGSIIVSTFLIVLVSYIYII 200
>AB065840-1|BAC06059.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVV 74
++F D P+ +C D NT ++IF I G + + +++++
Sbjct: 176 HFFCDTSPILALSCTDTDNTEMLIFIIAGSTLMVSLITISASYVSIL 222
>AB065757-1|BAC05977.1| 311|Homo sapiens seven transmembrane helix
receptor protein.
Length = 311
Score = 30.7 bits (66), Expect = 7.3
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = -2
Query: 241 PFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVV 74
P+ + +YF D P+ C D +++IF G A F++ + ++++V
Sbjct: 166 PYCGPNQIQHYFCDAPPILKLACADTSANVMVIFVDIGIVASGCFVLIVLSYVSIV 221
>AB065658-1|BAC05884.1| 312|Homo sapiens seven transmembrane helix
receptor protein.
Length = 312
Score = 30.7 bits (66), Expect = 7.3
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVV 74
++F D P+ +C D NT ++IF I G + + +++++
Sbjct: 176 HFFCDTSPILALSCTDTDNTEMLIFIIAGSTLMVSLITISASYVSIL 222
>AF399608-1|AAK95093.1| 216|Homo sapiens olfactory receptor
protein.
Length = 216
Score = 30.3 bits (65), Expect = 9.7
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -2
Query: 241 PFLSCTKKIYYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYYFIAVV 74
PF + + F D P+ + C D +L+ F I +A FL+ L ++ ++
Sbjct: 100 PFCGPNRIQHVFCDFPPVLSLACTDTSTNVLVDFVINSCKILATFLLILCSYVQII 155
>AB065849-1|BAC06067.1| 314|Homo sapiens seven transmembrane helix
receptor protein.
Length = 314
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 214 YYFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYL--YYFIAV 77
++F DK + T TC ++H + LI+ I N LV L Y FI +
Sbjct: 174 HFFCDKPAVITLTCSEKHISELILVLISSFNVFFALLVTLISYLFILI 221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,001,020
Number of Sequences: 237096
Number of extensions: 1941234
Number of successful extensions: 3626
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3625
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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