Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H07
         (881 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81581-10|CAN86611.1|  309|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z81581-9|CAN86610.1|  307|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z74042-10|CAA98524.1|  307|Caenorhabditis elegans Hypothetical p...    30   1.9  
AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical ...    29   4.4  
AC084159-14|AAK39369.2|  480|Caenorhabditis elegans Hypothetical...    28   7.7  

>Z81581-10|CAN86611.1|  309|Caenorhabditis elegans Hypothetical
           protein T02E1.5b protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 11/22 (50%), Positives = 19/22 (86%)
 Frame = +2

Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
           +VLWDIN+QG ++T+K ++ +G
Sbjct: 68  LVLWDINEQGNKETLKELEAMG 89


>Z81581-9|CAN86610.1|  307|Caenorhabditis elegans Hypothetical
           protein T02E1.5a protein.
          Length = 307

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 11/22 (50%), Positives = 19/22 (86%)
 Frame = +2

Query: 596 IVLWDINKQGXEDTVKLVKGVG 661
           +VLWDIN+QG ++T+K ++ +G
Sbjct: 66  LVLWDINEQGNKETLKELEAMG 87


>Z83104-7|CAH60780.1|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 157 TILIIFNIYGENAIALFLVYLYYFIAVVYK 68
           TIL + NI G N IA    +LY+F+ ++Y+
Sbjct: 379 TILFVLNIMGSN-IAFMFSFLYFFVDLLYQ 407


>Z70685-2|CAA94606.2|  762|Caenorhabditis elegans Hypothetical
           protein R07D5.2 protein.
          Length = 762

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 157 TILIIFNIYGENAIALFLVYLYYFIAVVYK 68
           TIL + NI G N IA    +LY+F+ ++Y+
Sbjct: 379 TILFVLNIMGSN-IAFMFSFLYFFVDLLYQ 407


>Z74042-10|CAA98524.1|  307|Caenorhabditis elegans Hypothetical
           protein T11F9.11 protein.
          Length = 307

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 596 IVLWDINKQGXEDTVKLVKGVGG 664
           +V+WD+NK G E+T   V   GG
Sbjct: 66  VVIWDVNKDGAEETKNQVVKAGG 88


>AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical
           protein Y60A3A.14 protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
 Frame = -2

Query: 337 LLGLFRHFLFICDTCLCFWLLYITLYTPDSNGPFLSCTKKIYYFVDKRPLYTF---TCID 167
           L    + F F  +    FW   I+LY      PF +CT  ++YF +K P   F   T   
Sbjct: 153 LFNFVQIFRFSAENSTGFWHHTISLYFLL---PFTACTAILFYF-NKYPSRVFVGDTFCY 208

Query: 166 RHNTILIIFNIYGENAIALFLVYLYYFIAVVYKYNNLVVLAP 41
                L + +I G  +  L L ++   I  +Y    L  L P
Sbjct: 209 WSGMTLAVVSILGHFSKTLMLFFVPQIINFLYSIPQLFHLVP 250


>AC084159-14|AAK39369.2|  480|Caenorhabditis elegans Hypothetical
           protein Y73B3A.6 protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = -2

Query: 247 NGPFLSCTKKIY-YFVDKRPLYTFTCIDRHNTILIIFNIYGENAIALFLVYLYY 89
           NGP+ +  K    Y +  RP Y     +R+NTI++   +Y + + ALF  +L Y
Sbjct: 363 NGPWKTLIKNFTSYVMSFRPDYIIA--NRNNTIMMTSLLYHQVSAALFEPFLKY 414


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,512,667
Number of Sequences: 27780
Number of extensions: 314131
Number of successful extensions: 771
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)