Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H04
(851 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 266 1e-71
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 263 1e-70
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 263 1e-70
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 261 4e-70
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 261 5e-70
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 261 5e-70
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 260 1e-69
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 259 2e-69
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 258 3e-69
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 138 4e-33
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 138 4e-33
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 135 3e-32
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 135 3e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 133 2e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 129 2e-30
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 129 2e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 114 6e-26
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 113 1e-25
At4g37190.1 68417.m05265 expressed protein 34 0.14
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 3.0
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 5.2
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 5.2
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 9.1
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 266 bits (652), Expect = 1e-71
Identities = 115/133 (86%), Positives = 129/133 (96%), Gaps = 1/133 (0%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 269
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 270 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 449
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 450 VRKEAESCDCLQG 488
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 191
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKLSTP
Sbjct: 193 LVENADECMVLDNEALYDICFRTLKLSTP 221
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT L FP Q N D
Sbjct: 221 PSFGDLNHLISATMSGVTCSLRFPGQLNSD 250
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (644), Expect = 1e-70
Identities = 114/132 (86%), Positives = 127/132 (96%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKL+TP
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (644), Expect = 1e-70
Identities = 116/133 (87%), Positives = 127/133 (95%), Gaps = 1/133 (0%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 269
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 270 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 449
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 450 VRKEAESCDCLQG 488
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 191
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKLSTP
Sbjct: 193 LVENADECMVLDNEALYDICFRTLKLSTP 221
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT L FP Q N D
Sbjct: 221 PSFGDLNHLISATMSGVTCSLRFPGQLNSD 250
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 261 bits (640), Expect = 4e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 750 HPTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
+PT+GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 219 NPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKL+ P
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLANP 220
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (639), Expect = 5e-70
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKL+TP
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (639), Expect = 5e-70
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKL+TP
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 260 bits (636), Expect = 1e-69
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+ DCLQG
Sbjct: 121 RKEAENSDCLQG 132
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 750 HPTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
+PT+GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 219 NPTFGDLNHLISATMSGVTCCLRFPGQLNSD 249
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKL+ P
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLANP 220
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 259 bits (634), Expect = 2e-69
Identities = 113/132 (85%), Positives = 126/132 (95%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKLSTP
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLSTP 220
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 258 bits (633), Expect = 3e-69
Identities = 112/132 (84%), Positives = 125/132 (94%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 272
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 273 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 452
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 453 RKEAESCDCLQG 488
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVH
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 190
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
LVEN DE +DNEALYDICFRTLKL+TP
Sbjct: 192 LVENADECMVLDNEALYDICFRTLKLTTP 220
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
P++GDLNHL+S T+SGVT CL FP Q N D
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 138 bits (334), Expect = 4e-33
Identities = 90/254 (35%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 626
VRK A++C LQG G L +R + TI S
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLG---SLLLERLSVDYGKKSKLGFTIYPSPQV 177
Query: 627 SSRTVQRH-TFSSSI*LKTQTKPTVSTTRLSTISASAR-*NYPHPTYGDLNHLVSLTISG 800
S+ V+ + + S+ L T V + R + PTY +LN L+S IS
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237
Query: 801 VTTCLXFPXQXNXD 842
+TT L F N D
Sbjct: 238 LTTSLRFDGAINVD 251
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
++ +Y + +++ PSP+VS VVEPYN+ LS H
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTH 192
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVAVLLDNEAIYDICRRSLDIERP 222
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 138 bits (334), Expect = 4e-33
Identities = 90/254 (35%), Positives = 126/254 (49%), Gaps = 4/254 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 626
VRK A++C LQG G L +R + TI S
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLG---SLLLERLSVDYGKKSKLGFTIYPSPQV 177
Query: 627 SSRTVQRH-TFSSSI*LKTQTKPTVSTTRLSTISASAR-*NYPHPTYGDLNHLVSLTISG 800
S+ V+ + + S+ L T V + R + PTY +LN L+S IS
Sbjct: 178 STAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISS 237
Query: 801 VTTCLXFPXQXNXD 842
+TT L F N D
Sbjct: 238 LTTSLRFDGAINVD 251
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
++ +Y + +++ PSP+VS VVEPYN+ LS H
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTH 192
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVAVLLDNEAIYDICRRSLDIERP 222
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 135 bits (327), Expect = 3e-32
Identities = 88/254 (34%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 626
+RK A++C LQG G L +R + T+ S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLG---SLLLERLSVDYGKKSKLGFTVYPSPQV 177
Query: 627 SSRTVQRH-TFSSSI*LKTQTKPTVSTTRLSTISASAR-*NYPHPTYGDLNHLVSLTISG 800
S+ V+ + + S+ L T ++ + R N PTY +LN LVS IS
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISS 237
Query: 801 VTTCLXFPXQXNXD 842
+T L F N D
Sbjct: 238 LTASLRFDGALNVD 251
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
++ +Y + ++V PSP+VS +VVEPYN+ LS H
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 192
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD + +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVSILLDNEAIYDICRRSLNIERP 222
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 135 bits (327), Expect = 3e-32
Identities = 88/254 (34%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQGIPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 626
+RK A++C LQG G L +R + T+ S
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLG---SLLLERLSVDYGKKSKLGFTVYPSPQV 177
Query: 627 SSRTVQRH-TFSSSI*LKTQTKPTVSTTRLSTISASAR-*NYPHPTYGDLNHLVSLTISG 800
S+ V+ + + S+ L T ++ + R N PTY +LN LVS IS
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISS 237
Query: 801 VTTCLXFPXQXNXD 842
+T L F N D
Sbjct: 238 LTASLRFDGALNVD 251
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
++ +Y + ++V PSP+VS +VVEPYN+ LS H
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 192
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD + +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVSILLDNEAIYDICRRSLNIERP 222
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 2e-31
Identities = 60/134 (44%), Positives = 87/134 (64%), Gaps = 2/134 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 447 VVRKEAESCDCLQG 488
+RK A++C LQG
Sbjct: 121 RLRKLADNCTGLQG 134
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVVVLLDNEAIYDICRRSLDIERP 222
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 592 YSVVPSPKVSDTVVEPYNATLSVH 663
+++ PSP+VS VVEPYN+ LS H
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTH 192
Score = 35.5 bits (78), Expect = 0.045
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
PTY +LN L+S TIS +TT L F N D
Sbjct: 222 PTYSNLNRLISQTISSLTTSLRFDGAINVD 251
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 2e-30
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQG 488
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
++ +Y + ++V PSP+VS +VVEPYN+ LS H
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 192
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD + +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVSILLDNEAIYDICRRSLSIERP 222
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
PTY +LN LVS IS +T L F N D
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVD 251
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 2e-30
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 266
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 267 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 446
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 447 VVRKEAESCDCLQG 488
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 553 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVH 663
++ +Y + ++V PSP+VS +VVEPYN+ LS H
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTH 192
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2
Query: 668 LVENTDETYCIDNEALYDICFRTLKLSTP 754
L+E+TD + +DNEA+YDIC R+L + P
Sbjct: 194 LLEHTDVSILLDNEAIYDICRRSLSIERP 222
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 753 PTYGDLNHLVSLTISGVTTCLXFPXQXNXD 842
PTY +LN LVS IS +T L F N D
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVD 251
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 114 bits (275), Expect = 6e-26
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 8/257 (3%)
Frame = +3
Query: 96 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 275
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 276 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 449
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 450 VRKEAESCDCLQG-IPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 626
+ +EA+ D L+G + ++A + N R + + + + ++ +
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR----YSKKLVQTYSVFPNQME 177
Query: 627 SSRTVQRHTFSSSI*LKTQT-----KPTVSTTRLSTISASAR*NYPHPTYGDLNHLVSLT 791
+S V + ++S + LK T + T L+ I A R + +PT+ N LVS
Sbjct: 178 TSDVVVQ-PYNSLLTLKRLTLNADCVVVLDNTALNRI-AVERLHLTNPTFAQTNSLVSTV 235
Query: 792 ISGVTTCLXFPXQXNXD 842
+S TT L +P N D
Sbjct: 236 MSASTTTLRYPGYMNND 252
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 556 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSV 660
+ + Y +++ TYSV P+ + SD VV+PYN+ L++
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTL 192
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 113 bits (273), Expect = 1e-25
Identities = 76/257 (29%), Positives = 131/257 (50%), Gaps = 8/257 (3%)
Frame = +3
Query: 96 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 275
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 276 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 449
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 450 VRKEAESCDCLQG-IPTDTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSCTIT*SVGH 626
+ +EA+ D L+G + ++A + N R + + + + ++ +
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDR----YSKKLVQTYSVFPNQME 177
Query: 627 SSRTVQRHTFSSSI*LKTQT-----KPTVSTTRLSTISASAR*NYPHPTYGDLNHLVSLT 791
+S V + ++S + LK T + T L I A R + +PT+ N LVS
Sbjct: 178 TSDVVVQ-PYNSLLTLKRLTLNADCVVVLDNTALGRI-AVERLHLTNPTFAQTNSLVSTV 235
Query: 792 ISGVTTCLXFPXQXNXD 842
+S TT L +P N D
Sbjct: 236 MSASTTTLRYPGYMNND 252
Score = 34.7 bits (76), Expect = 0.079
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 556 IREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSV 660
+ + Y +++ TYSV P+ + SD VV+PYN+ L++
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTL 192
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +3
Query: 93 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 260
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 261 GKYVPRAILVDLEP--GTMDS 317
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +3
Query: 426 LVDSVLDVVRKEAESCDCLQ 485
+++SV VVRKEAE+C+CLQ
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 398 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 231
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 230 ALQLQVRVPMVGTG 189
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 398 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 231
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 230 ALQLQVRVPMVGTG 189
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 263 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 84
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,488,717
Number of Sequences: 28952
Number of extensions: 328892
Number of successful extensions: 1043
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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