Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H02
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   0.73 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.0  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 503 LSSTPSKRKFPLPSRNTSNTQYTYLNLTPLKRKY 604
           L  T  + K P    NT  TQY  LN   L R+Y
Sbjct: 171 LEKTSEELKIPKAKINTGKTQYN-LNSKSLPRQY 203


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 491 KCPYLSSTPSKRKFPLPSRNTSNTQYTY 574
           K P  + +PS     LP++ TS +  TY
Sbjct: 69  KSPQGAPSPSSTPSSLPTQRTSTSNPTY 96


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 618 LDFIRYFLFNGVRFRYVY 565
           +DF+R F FNG+   + Y
Sbjct: 624 IDFLREFQFNGLDVDWEY 641



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 607 YEVKVHVDKPYEVKV 651
           Y+VK+  D PYE  +
Sbjct: 886 YKVKLEYDGPYETSI 900


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 428 TGTFFTTSTVLMCSW 384
           TG FFT   VLM  W
Sbjct: 426 TGPFFTFCNVLMEMW 440


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,114
Number of Sequences: 336
Number of extensions: 2602
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)