Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H02
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0913 + 22540078-22540166,22540280-22540420,22541151-225412...    31   1.5  
02_04_0275 - 21469391-21470650                                         31   1.5  
06_01_0778 + 5816588-5816885,5817554-5817615,5818764-5818905,581...    29   6.0  

>08_02_0913 +
           22540078-22540166,22540280-22540420,22541151-22541281,
           22542278-22542460,22542555-22543195
          Length = 394

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 522 FDGVELRYGHFHLIGYFLLDGIGD 451
           FDG+E+   H ++I  FL DGI D
Sbjct: 183 FDGIEIHGAHGYIIDQFLKDGIND 206


>02_04_0275 - 21469391-21470650
          Length = 419

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/42 (28%), Positives = 27/42 (64%)
 Frame = +2

Query: 440 SRNTSPIPSRRKYPMR*KCPYLSSTPSKRKFPLPSRNTSNTQ 565
           +R+T+P+  R  +P R +  +L S+  KR+ P P + +++++
Sbjct: 183 ARSTAPMAPRVNFPQRTRTQFLPSSGVKRRMPSPPQVSASSE 224


>06_01_0778 +
           5816588-5816885,5817554-5817615,5818764-5818905,
           5819969-5820064,5820147-5820266,5820401-5820663,
           5821507-5821617
          Length = 363

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 421 PSLPPQQF*CARGVHDDRGGSRLRWQL 341
           P LPP+   C   VH D GG+ +RW L
Sbjct: 247 PPLPPE---CNAQVHTDYGGAAVRWGL 270


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,303,742
Number of Sequences: 37544
Number of extensions: 322842
Number of successful extensions: 926
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)