Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_H02
(829 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g06050.2 68415.m00664 12-oxophytodienoate reductase (OPR3) / ... 31 0.71
At2g06050.1 68415.m00663 12-oxophytodienoate reductase (OPR3) / ... 31 0.71
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 29 5.0
At1g14070.1 68414.m01664 xyloglucan fucosyltransferase, putative... 29 5.0
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 28 6.6
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 28 6.6
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 6.6
At3g52680.1 68416.m05803 F-box family protein contains F-box dom... 28 8.7
At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]... 28 8.7
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 28 8.7
At1g61050.1 68414.m06873 alpha 1,4-glycosyltransferase family pr... 28 8.7
>At2g06050.2 68415.m00664 12-oxophytodienoate reductase (OPR3) /
delayed dehiscence1 (DDE1) nearly identical to DELAYED
DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314];
contains Pfam profile PF00724:oxidoreductase,
FAD/FMN-binding; identical to cDNA OPDA-reductase
homolog GI:5059114
Length = 391
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 522 FDGVELRYGHFHLIGYFLLDGIGD 451
FDG+E+ H +LI FL DGI D
Sbjct: 180 FDGIEIHGAHGYLIDQFLKDGIND 203
>At2g06050.1 68415.m00663 12-oxophytodienoate reductase (OPR3) /
delayed dehiscence1 (DDE1) nearly identical to DELAYED
DEHISCENCE1 [GI:7688991] and to OPR3 [GI:10242314];
contains Pfam profile PF00724:oxidoreductase,
FAD/FMN-binding; identical to cDNA OPDA-reductase
homolog GI:5059114
Length = 391
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 522 FDGVELRYGHFHLIGYFLLDGIGD 451
FDG+E+ H +LI FL DGI D
Sbjct: 180 FDGIEIHGAHGYLIDQFLKDGIND 203
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 115 PSVCLSPPWQRQPRPTMPP 59
PS C SPP + QP+P PP
Sbjct: 48 PSPCPSPPPKPQPKPVPPP 66
>At1g14070.1 68414.m01664 xyloglucan fucosyltransferase, putative
(FUT7) nearly identical to SP|Q9XI81 Probable
fucosyltransferase 7 (EC 2.4.1.-) (AtFUT7) {Arabidopsis
thaliana}; similar to xyloglucan fucosyltransferase
GI:5231145 from (Arabidopsis thaliana)
Length = 509
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -1
Query: 238 YLRALHSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSS--LRLPSVCLSPPWQRQPRPTM 65
YL LH +RD+ + ++ + L + P+ +V S +PS+ L+P +Q +
Sbjct: 207 YLHLLHDYRDQDKMFFCQKD----QSLVDKVPWLVVKSNLYFIPSLWLNPSFQTELIKLF 262
Query: 64 PPKITVYF 41
P K TV++
Sbjct: 263 PQKDTVFY 270
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 504 RYGHFHLIGYFLLDGIGDVFLDC 436
R+GH L+ L DG+ DV+ DC
Sbjct: 142 RFGHDSLVDGMLKDGLWDVYNDC 164
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 504 RYGHFHLIGYFLLDGIGDVFLDC 436
R+GH L+ L DG+ DV+ DC
Sbjct: 137 RFGHDSLVDGMLKDGLWDVYNDC 159
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 160 LCHRCPFCLVSSLRLPSVCLSPP 92
LC RC L SS +PSV + PP
Sbjct: 331 LCVRCALYLCSSSNVPSVTVGPP 353
>At3g52680.1 68416.m05803 F-box family protein contains F-box domain
Pfam:PF00646
Length = 456
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 159 YVIDAPFVLFLLFDCLRC 106
YVI+APF+ +LL + LRC
Sbjct: 238 YVINAPFLKYLLIEELRC 255
>At3g44670.1 68416.m04804 disease resistance protein
RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain
signature TIR-NBS-LRR exists, suggestive of a disease
resistance protein. Closest Col-0 homolog to both RPP1
Ws-A and RPP1 Ws-C
Length = 872
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 414 KEGACSVYSRETRPLYRREESTL*GESARTSA 509
K G C + RETR L R L ES+R S+
Sbjct: 787 KIGECGILQRETRSLRRSSSPDLSPESSRVSS 818
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 414 KEGACSVYSRETRPLYRREESTL*GESARTSA 509
K G C + RETR L R L ES+R S+
Sbjct: 1155 KIGECGILQRETRSLRRSSSPDLSPESSRVSS 1186
>At1g61050.1 68414.m06873 alpha 1,4-glycosyltransferase family
protein / glycosyltransferase sugar-binding DXD
motif-containing protein low similarity to
alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens
[gi:5726306], Gb3 synthase, Rattus norvegicus
[gi:9082162] ; contains Pfam profiles PF04572: Alpha
1,4-glycosyltransferase conserved region, PF04488:
Glycosyltransferase sugar-binding region containing DXD
motif
Length = 435
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 229 ALHSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRL 116
A+H + R ++H+++ H C FC SSL L
Sbjct: 397 AVHLWNRESKKLRIEEGSIIHQLMSHSCIFCNSSSLHL 434
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,775,720
Number of Sequences: 28952
Number of extensions: 246621
Number of successful extensions: 664
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -