Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_H01
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical pr...    30   2.4  
Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z82263-4|CAB62794.1|  316|Caenorhabditis elegans Hypothetical pr...    28   9.7  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   9.7  

>U97403-2|AAB52472.2|  649|Caenorhabditis elegans Hypothetical
           protein T10E9.4 protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = +2

Query: 272 NLEDIIVKPTESNSVFTDKNGESCKCVPYYLCNKNNE-GVDVNNASVTGWGVLDVRFGEE 448
           N  D +  PT  N  F D++G     + +  C K  +   D+ +  V   G+    + E 
Sbjct: 188 NFCDSVYNPTFKNHRFLDRSGPKESSLQF--CYKQPDLKPDLKHVKVD-LGLKLCHYNE- 243

Query: 449 DCQESVEICCTNPITEPVPKPQPDPLEVEGM 541
           DC    EIC  + IT      QP+ + V G+
Sbjct: 244 DCGNETEICHIDNITVYANVTQPEKIAVPGI 274


>Z37983-4|CAA86057.1|  803|Caenorhabditis elegans Hypothetical
           protein B0393.4 protein.
          Length = 803

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 467 EICCTNPITEPVPKPQPDPL 526
           ++  T P+ EPVP+P P+P+
Sbjct: 107 KVAVTLPVPEPVPEPVPEPV 126


>Z82263-4|CAB62794.1|  316|Caenorhabditis elegans Hypothetical
           protein C47A4.3 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 534 STSRGSGCGFGTGSVMGLVQQ 472
           +  RG+GCGFG  SV+ L  +
Sbjct: 218 NNQRGAGCGFGRDSVLNLCSE 238


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 519  SGCGFG-TGSVMGLVQQISTLSWQSSSPNLTSSTPHPVTLALLTST 385
            SG GF  TG    +  QI  L   SS+P++    P P T A  TST
Sbjct: 1173 SGTGFSFTGDTQQVADQIG-LKMASSNPSVYCPPPVPSTAAPSTST 1217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,796,499
Number of Sequences: 27780
Number of extensions: 318768
Number of successful extensions: 1320
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)