Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G22
(865 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 50 2e-06
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 47 2e-05
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-05
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 44 1e-04
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 42 6e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.52
SB_27305| Best HMM Match : MFMR (HMM E-Value=0.53) 32 0.69
SB_1993| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.69
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 31 0.92
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014) 29 3.7
SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012) 29 3.7
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 29 3.7
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047) 29 6.5
SB_9870| Best HMM Match : GspM (HMM E-Value=1.9) 29 6.5
SB_1968| Best HMM Match : PQQ (HMM E-Value=0.58) 28 8.5
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +2
Query: 206 RGGLAVDDESIPHRPPFIAHISNLPYDVEESAIAELFAD-PKVTNLRLPREGDRL--KGH 376
R LA +D++ H+ I NLP+D+EE + ELF V ++RL R+ KG
Sbjct: 42 RVDLASNDKAHDHQRSVF--IGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGF 99
Query: 377 GYVDFEDRENLIEALNMPDLTIGGRRVRI 463
GYV FE ++ ++ AL M + GR++R+
Sbjct: 100 GYVLFESKDAVVFALKMNNAEFKGRKIRV 128
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +2
Query: 182 LPSASRAARGGLAVDDESIPHRPPFIAHISNLPYDVEESAIAELFADPK 328
LP+A R++R VD IP PPF A + NLPYDVE I E F+ K
Sbjct: 254 LPTAPRSSRP-TEVDLSKIPDNPPFTAFLGNLPYDVEREDILEFFSSVK 301
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 266 ISNLPYDVEESAIAELFADPKVT-NLRL-PREGDRLKGHGYVDFEDRENLIEALNMPDLT 439
+SNLP+D +ES I ELF+ V +RL + KG+GYV++E + A+ D T
Sbjct: 175 VSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLDKT 234
Query: 440 -IGGRRVRIEVSTP 478
+ GR + + +S P
Sbjct: 235 EVKGRTISVALSNP 248
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 44.8 bits (101), Expect = 9e-05
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 197 RAARGGLAVDDESIPHRPPFIAHISNLPYDVEESAIAELFADPKVTNLRLPREGDRLKGH 376
R RGG + + P I + NL YD ++ F + RE +G
Sbjct: 272 RGGRGGFSGGRDQNPPNSSLI--VRNLSYDTTTDSLGAAFEGCSNAKVIFDRESGESRGF 329
Query: 377 GYVDFEDRENLIEALN-MPDLTIGGRRVRIEVSTP 478
G+VD++D E + L+ M + GR+VR++ ++P
Sbjct: 330 GFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASP 364
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 230 ESIPHRPPFIAHISNLPYDVEESAIAELFADPKVT-NLRLPREGDRLKGHGYVDFEDREN 406
+++P + + NL +D +E +A F + ++ R+ + R +G GY DF +E+
Sbjct: 172 KTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSKED 231
Query: 407 LIEALNMPDLTIGGRRVRI 463
+AL + GR +RI
Sbjct: 232 YNKALELNGEDCCGREIRI 250
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +2
Query: 266 ISNLPYDVEESAIAELFADP-KVTNLRL--PREGDRLKGHGYVDFEDRENLIEAL-NMPD 433
+ N+PY+ E + E+F++ V + RL RE + KG+G+ +++D+E + A+ N+
Sbjct: 29 VGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 88
Query: 434 LTIGGRRVRIE 466
+ GR +R++
Sbjct: 89 YELNGRALRVD 99
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 FIAHISNLPYDVEESAIAELFADPKVTNLRL--PREGDRLKGHGYVDFEDRENLIEALNM 427
+I + NLP+D+ + + F ++ RL + + KG G+++ +D +ALN+
Sbjct: 74 YILFVGNLPFDLTTEKVLDHFRCAGSSSFRLLTKKTDNSSKGCGFLEIDDSIGYTKALNL 133
Query: 428 PDLTIGGRRVRIEVS 472
+GGR++ +EV+
Sbjct: 134 HHSYLGGRKINVEVT 148
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Frame = +2
Query: 239 PHRPPFIAHISNLPYDVEESAIAELFAD-PKVTNLRLPRE---GDRLKGHGYVDFEDREN 406
P P + + NLP++ E+ +L + + L L R GD KG+G+V++ REN
Sbjct: 108 PAPPESLLFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDS-KGYGFVEYATREN 166
Query: 407 LIEA----LNMPDLTIGGRRVRI 463
++A LN IGGR +R+
Sbjct: 167 AMQAKQQLLNTASKYIGGRILRV 189
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 32.3 bits (70), Expect = 0.52
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +2
Query: 170 APVVLPSASRAARGGLAVDDESIPHR-PPFIAHISNLPYDVEES---AIAELFADPKVTN 337
AP+++ ++A + LA + E + P ++ +L +++ E+ A+ E F
Sbjct: 214 APIMV-MLTQAEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQ 272
Query: 338 LRLPREGDRLKGHGYVDFEDRENLIEAL-NMPDLTIGGRRVRI 463
L E +R KG+G+V F + E A+ M + GR ++I
Sbjct: 273 LIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKI 315
>SB_27305| Best HMM Match : MFMR (HMM E-Value=0.53)
Length = 823
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -1
Query: 562 GAPVTHCTLRVIVPISIRASTSSHSTVIWSRHLNSYSPATYCQVWHIESFN*IFPVFKIN 383
G V H + +V P RA++S S V +++Y+ Y W +ES P F++
Sbjct: 2 GVGVKHLSNQVAKPDVSRAASSCDSDVDRQELISNYASENYLSRWSLESEEAQSPTFEVT 61
Query: 382 IS 377
I+
Sbjct: 62 IT 63
>SB_1993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 31.9 bits (69), Expect = 0.69
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -1
Query: 562 GAPVTHCTLRVIVPISIRASTSSHSTVIWSRHLNSYSPATYCQVWHIESFN*IFPVFKIN 383
G V H + +V P RA++S S V +++Y+ Y W +ES P F++
Sbjct: 2 GVGVKHLSNQVAKPDVSRAASSCDSDVDRQELISNYASENYLSRWSLESEEAQSPTFEVT 61
Query: 382 IS 377
I+
Sbjct: 62 IT 63
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 371 GHGYVDFEDRENLIEAL-NMPDLTIGGRRVRI 463
G G V+FE +++L A+ + D +GGRR+R+
Sbjct: 835 GEGVVEFESKDDLNTAIEKLDDTELGGRRIRV 866
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 275 LPYDVEESAIAELFAD-PKVTNLRLPREGDRLKGHGYVDFEDR---ENLIEALNMPDLTI 442
LP DV ES + + K+ ++ L R G+G+V+F+D E+ + LN DL
Sbjct: 696 LPRDVRESDVEKFLRGYGKIRDISLKR------GYGFVEFDDHRDAEDAVHDLNGRDLI- 748
Query: 443 GGRRVRIEVS 472
G RV +E S
Sbjct: 749 -GERVVVEFS 757
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/109 (24%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Frame = +2
Query: 257 IAHISNLPYDVEESAIAELFAD----PKVTNLRLPREGDRLKGHGYVDFEDRENLIEALN 424
+ + LPY + IA+ F P + L EG + G G+V+F E +A+
Sbjct: 39 VVKLRGLPYGCSKEEIAQFFTGLEIVPNGITITLDEEG-KTTGEGFVEFASPEIAGQAMQ 97
Query: 425 MPDLTIGGRRVRIEVSTPXXXXXXXXXXXXXXXXXXPERTMGDWRSGPR 571
IG R + I S+ P MG GPR
Sbjct: 98 KHKEKIGHRYIEIFKSSKSDIKYVLKPKPLMSTRPGPYDRMGGPFGGPR 146
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 209 GGLAVDDESIPHRPPFIAHISNLPYDVEESAIAELFAD 322
GG +P PPF A + NLP + + + ++FAD
Sbjct: 41 GGGRSGPPRMPTEPPFTAFVGNLPINTVQGDLDQIFAD 78
>SB_48415| Best HMM Match : Pox_A32 (HMM E-Value=0.014)
Length = 988
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 155 ASHTRAPVVLPSASRAARGGLAVDDESIPHRPPFIA 262
A+ TR P P A RAA A D + P RPP A
Sbjct: 929 AAFTRTPAGGPGAERAADPHTAADGGTPPTRPPLAA 964
>SB_27312| Best HMM Match : Pox_A32 (HMM E-Value=0.012)
Length = 1115
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 155 ASHTRAPVVLPSASRAARGGLAVDDESIPHRPPFIA 262
A+ TR P P A RAA A D + P RPP A
Sbjct: 648 AAFTRTPAGGPGAERAADPHTAADGGTPPTRPPLAA 683
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/71 (26%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Frame = +2
Query: 263 HISNLPYDVEESAIAELF-ADPKVTNLRLPREG--DRLKGHGYVDFEDRENLIEAL-NMP 430
+I+++ D+ E I +F A KV + L +E + KG+G++++E++++ +A+ +M
Sbjct: 202 YIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMN 261
Query: 431 DLTIGGRRVRI 463
+GG+ +R+
Sbjct: 262 LFDLGGQFLRV 272
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 618 NEIGIGIAKETRV-QIXVRXXWRDAXRAPEPRAGPLRXGGTPSDV 749
N IG G E ++ + V+ W+ R P+ G + G P+D+
Sbjct: 196 NSIGHGTRSEEKILTVNVKKGWKAGTRITFPKEGDQKPGRIPADI 240
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/93 (22%), Positives = 40/93 (43%)
Frame = -2
Query: 321 SANNSAIALSSTS*GRLEMCAINGGRCGIDSSSTAKPPRAAREAEGSTTGARVCDAYPKF 142
S++NS+ +S S + + SSS + + + S + + + +
Sbjct: 167 SSSNSSSNSNSNSSSSSNSSSNSNSSSNSSSSSNSSSNSSRSSSSSSNSNSNSSSSSSRS 226
Query: 141 SVSSSAAFAQLLVVAIVVGSAIMLVMSALIHFA 43
S SSS A A + VA+ V A+ + ++ I A
Sbjct: 227 SSSSSVAVAVAVAVAVAVAVAVAVAVAVAIAVA 259
>SB_27943| Best HMM Match : Pox_A32 (HMM E-Value=0.047)
Length = 983
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 155 ASHTRAPVVLPSASRAARGGLAVDDESIPHRPPFIA 262
A+ TR P P A RAA A D + P RPP A
Sbjct: 835 AAFTRTPAGGPGAERAADPHPAADGGAPPTRPPLAA 870
>SB_9870| Best HMM Match : GspM (HMM E-Value=1.9)
Length = 522
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 155 ASHTRAPVVLPSASRAARGGLAVDDESIPHRPPFIA 262
A+ TR P P A RAA A D + P RPP A
Sbjct: 291 AAFTRTPAGGPGAERAADPHPAADGGAPPTRPPLAA 326
>SB_1968| Best HMM Match : PQQ (HMM E-Value=0.58)
Length = 529
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 60 PTSQAL*QNRPQSQLPTIGRTLQKMKRKILDMHRIHGHQLYCLQL 194
P +Q++ N P+ + +TL++ + + MHR+ H LY L+L
Sbjct: 354 PLAQSVKLNVPKKTKVFVDQTLRE-RESAVSMHRMFQHDLYLLRL 397
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,843,435
Number of Sequences: 59808
Number of extensions: 425010
Number of successful extensions: 1250
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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