Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G21
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    30   0.10 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.42 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   3.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.8  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   6.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   6.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.0  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 29.9 bits (64), Expect = 0.10
 Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 140  EWSDYEKMSAPIIITVPNNYLVKEEDSDMILDVASPSPSRKRRLDHLTWEEK-MQRKKLK 316
            EW D  + +A  I++V      +E+ +    + A P P+     D    E + ++R++++
Sbjct: 997  EWWDRIQQAARRILSVLQEDWREEQQTLAAAEAAQPDPASSLPEDMAEAERRLLRRREVR 1056

Query: 317  NRVAAQTSRDRKKAKMDEME 376
            NR A +  + +++ ++ + E
Sbjct: 1057 NRSAQRRRQQQRQQRLGDFE 1076


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 293 KMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDFKEMNERLTSEVE-SLKALNE 451
           K+Q++K+   +     + R++ ++  +ESQIR  +   +   +++E S K +NE
Sbjct: 688 KLQKEKITEELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLETSKKNINE 741


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +1

Query: 262 TATGPSDMGRKNAKKETEKSRGSTDFSRQKESQDGRNGESDKGFQRNE*ASHK 420
           T+  P  +    A  + E   G   F+     + GRN    +G+Q+ +  SH+
Sbjct: 116 TSAAPPQLLVSGASFDPEGDDGQGSFAEVVRHKWGRNTGKPRGYQQQQSQSHR 168


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +2

Query: 332  QTSRDRKKAKMDEMESQIRDFKEMNERLTSEVESLKALNERLISENTALREAAAAQS 502
            Q S+D+  +  DE+E+     ++ N+  T   E    L E L     A+ +A    S
Sbjct: 931  QKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSS 987


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 256 QETATGPSDMGRKNAKKE 309
           ++ A G SD GRK  KKE
Sbjct: 43  RKRAEGESDFGRKKKKKE 60


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 478  TRSGGGAERPGWARTSGVY 534
            T +GG    PGW  T GV+
Sbjct: 1149 TVAGGSGAGPGWHGTGGVH 1167


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +2

Query: 293  KMQRKKLKNRVAAQTSRDRKKAKMDEMESQIRDF-KEMNERLTSEVESLKALNERLISEN 469
            + +R++  NR+A    R+R++A   EM    +      ++    +VE+ +A N    SE 
Sbjct: 1086 RTERRREVNRLAVARLRERQRAARAEMHGAYQPAPSNDSDDDDDDVENRQATNAASTSE- 1144

Query: 470  TALREAAAAQSV 505
             A R AA    V
Sbjct: 1145 -AARTAAEESRV 1155


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +2

Query: 140  EWSDYEKMSAPIIITVPNNYLVKEE 214
            +W+D +  ++ I+ +  +N++ KEE
Sbjct: 1693 KWTDLDTTNSSILFSYRHNFIEKEE 1717


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +2

Query: 140  EWSDYEKMSAPIIITVPNNYLVKEE 214
            +W+D +  ++ I+ +  +N++ KEE
Sbjct: 1694 KWTDLDTTNSSILFSYRHNFIEKEE 1718


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,522
Number of Sequences: 2352
Number of extensions: 13688
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)