Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G19
(842 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 295 2e-80
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 292 2e-79
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 292 2e-79
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 291 5e-79
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 290 9e-79
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 290 9e-79
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 289 2e-78
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 288 3e-78
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 287 5e-78
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 137 1e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 137 1e-32
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 134 7e-32
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 134 7e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 133 1e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 132 4e-31
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 132 4e-31
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 120 2e-27
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 119 2e-27
At4g37190.1 68417.m05265 expressed protein 33 0.24
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.9
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 5.1
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 8.9
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 28 8.9
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 295 bits (724), Expect = 2e-80
Identities = 132/175 (75%), Positives = 149/175 (85%), Gaps = 1/175 (0%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 249
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 250 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 429
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 430 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
VRKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 175
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADE 199
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 292 bits (716), Expect = 2e-79
Identities = 130/174 (74%), Positives = 147/174 (84%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 292 bits (716), Expect = 2e-79
Identities = 132/175 (75%), Positives = 147/175 (84%), Gaps = 1/175 (0%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 249
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 250 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 429
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 430 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
VRKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 175
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 172 PSPKVSDTVVEPYNATLSVHQLVENADE 199
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 291 bits (713), Expect = 5e-79
Identities = 132/174 (75%), Positives = 145/174 (83%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 290 bits (711), Expect = 9e-79
Identities = 130/174 (74%), Positives = 145/174 (83%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 290 bits (711), Expect = 9e-79
Identities = 130/174 (74%), Positives = 145/174 (83%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 289 bits (709), Expect = 2e-78
Identities = 132/174 (75%), Positives = 145/174 (83%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+ DCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 288 bits (707), Expect = 3e-78
Identities = 129/174 (74%), Positives = 146/174 (83%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 287 bits (705), Expect = 5e-78
Identities = 128/174 (73%), Positives = 145/174 (83%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 252
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 253 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 432
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 433 RKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPK 594
RKE+E+CDCLQGFQ KIREEYPDR+M T+SV P PK
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPK 174
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXDE 665
PSPKVSDTVVEPYNATLSVHQLVEN DE
Sbjct: 171 PSPKVSDTVVEPYNATLSVHQLVENADE 198
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 137 bits (331), Expect = 1e-32
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 427 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPKYQT 603
VRK +++C LQGF ++ +Y + +++ P P+ T
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTD 199
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 137 bits (331), Expect = 1e-32
Identities = 65/179 (36%), Positives = 99/179 (55%), Gaps = 2/179 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 427 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPKYQT 603
VRK +++C LQGF ++ +Y + +++ P P+ T
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVST 179
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTD 199
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 134 bits (324), Expect = 7e-32
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 427 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPKYQT 603
+RK +++C LQGF ++ +Y + ++V P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS +VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTD 199
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 134 bits (324), Expect = 7e-32
Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 2/179 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 427 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPKYQT 603
+RK +++C LQGF ++ +Y + ++V P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS +VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTD 199
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 133 bits (322), Expect = 1e-31
Identities = 59/135 (43%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 427 VVRKESESCDCLQGF 471
+RK +++C LQGF
Sbjct: 121 RLRKLADNCTGLQGF 135
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTAVVEPYNSVLSTHSLLEHTD 199
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 132 bits (318), Expect = 4e-31
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 427 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPKYQT 603
+RK +++C LQGF ++ +Y + ++V P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS +VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTD 199
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 132 bits (318), Expect = 4e-31
Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 246
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 247 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 426
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 427 VVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPRPKYQT 603
+RK +++C LQGF ++ +Y + ++V P P+ T
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 582 PSPKVSDTVVEPYNATLSVHQLVENXD 662
PSP+VS +VVEPYN+ LS H L+E+ D
Sbjct: 173 PSPQVSTSVVEPYNSVLSTHSLLEHTD 199
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 120 bits (288), Expect = 2e-27
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Frame = +1
Query: 76 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 255
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 256 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 429
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 430 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 585
+ +E++ D L+GF + + Y +++ TYSV P
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 591 KVSDTVVEPYNATLSVHQLVENXD 662
+ SD VV+PYN+ L++ +L N D
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNAD 200
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 119 bits (287), Expect = 2e-27
Identities = 56/172 (32%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Frame = +1
Query: 76 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 255
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 256 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 429
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 430 VRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 585
+ +E++ D L+GF + + Y +++ TYSV P
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFP 173
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 591 KVSDTVVEPYNATLSVHQLVENXD 662
+ SD VV+PYN+ L++ +L N D
Sbjct: 177 ETSDVVVQPYNSLLTLKRLTLNAD 200
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.1 bits (72), Expect = 0.24
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 73 MREIVHLQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 240
MREIV +Q G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 241 GKYVPRAILVDLEP--GTMDS 297
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 406 LVDSVLDVVRKESESCDCLQGF 471
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 72 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 158
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 420 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 304
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 549 PRQNHEHILSSPSPKVSDTVVEPYNATLS-VHQ 644
P+Q H H++ SP P S P ++T S VH+
Sbjct: 436 PQQPHHHVVHSPPPASSPPTSPPVHSTPSPVHK 468
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,313
Number of Sequences: 28952
Number of extensions: 314587
Number of successful extensions: 921
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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