Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G18
(856 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 190 2e-49
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 122 7e-29
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 118 1e-27
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 80 5e-16
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 49 1e-06
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 48 2e-06
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 46 5e-06
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 46 9e-06
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 45 2e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.12
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.21
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 30 0.48
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.5
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.4
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.5
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.5
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 27 4.5
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 5.9
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 26 5.9
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 5.9
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 26 5.9
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.8
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.8
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 26 7.8
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 26 7.8
SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|ch... 26 7.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 190 bits (464), Expect = 2e-49
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +3
Query: 264 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 443
P IVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFY 91
Query: 444 NELRVAPEEHPVLLTEAPLNPKANREKMTQ 533
NELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 92 NELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Score = 184 bits (449), Expect = 1e-47
Identities = 87/98 (88%), Positives = 92/98 (93%)
Frame = +1
Query: 535 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 714
I+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 181
Query: 715 GRDLTDYLMXILTERGYSFTTTAEREIVRDXKXKLCYV 828
GRDLTDYLM IL ERGY+F+TTAEREIVRD K KLCYV
Sbjct: 182 GRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYV 219
Score = 70.1 bits (164), Expect = 4e-13
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 173 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 280
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPS G+
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGR 37
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 122 bits (294), Expect = 7e-29
Identities = 56/97 (57%), Positives = 72/97 (74%)
Frame = +1
Query: 538 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 717
MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L H + RLD+AG
Sbjct: 123 MFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAG 182
Query: 718 RDLTDYLMXILTERGYSFTTTAEREIVRDXKXKLCYV 828
RD T YL+ +L +GY+F TA+ E VR+ K KLCYV
Sbjct: 183 RDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYV 219
Score = 91.9 bits (218), Expect = 1e-19
Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Frame = +3
Query: 264 PRIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 437
P IVGRP R + + KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +T
Sbjct: 30 PSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYT 89
Query: 438 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 533
F+ +L++ P +LLTE P+NP ANREKM +
Sbjct: 90 FFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Score = 39.1 bits (87), Expect = 8e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 179 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 280
E A +V+DNG+G K G+A D+ PR FPS G+
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGR 35
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 118 bits (284), Expect = 1e-27
Identities = 51/96 (53%), Positives = 74/96 (77%)
Frame = +1
Query: 541 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 720
+ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI + ++ GR
Sbjct: 129 YETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGR 188
Query: 721 DLTDYLMXILTERGYSFTTTAEREIVRDXKXKLCYV 828
D+TDYL L + G+ ++AE+EIVR+ K K CYV
Sbjct: 189 DVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYV 224
Score = 98.3 bits (234), Expect = 1e-21
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +3
Query: 264 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 443
P VGR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + +
Sbjct: 36 PTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYS 95
Query: 444 N-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 533
+ +L PEEHP+LLTE PL N+EK+ +
Sbjct: 96 DQQLNTLPEEHPLLLTEPPLANIRNKEKIAE 126
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 280
+ +DNGSG KAGFAGDD P+ +FP+ G+
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGR 41
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 79.8 bits (188), Expect = 5e-16
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 10/108 (9%)
Frame = +1
Query: 535 IMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 690
IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +P+ EGY +
Sbjct: 145 IMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGS 204
Query: 691 AILRLDLAGRDLTDYLMXILTERGY--SFTTTAEREIVRDXKXKLCYV 828
+I + LAGRD+T ++ +L +R S TAER K + CYV
Sbjct: 205 SIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYV 247
Score = 74.5 bits (175), Expect = 2e-14
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 321 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 497
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 498 LNPKANREKMTQ 533
LNP NRE +
Sbjct: 133 LNPPENRENTAE 144
Score = 38.3 bits (85), Expect = 0.001
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPS 268
+++DNG+G K G+AG+DAP VFP+
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPT 33
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 48.8 bits (111), Expect = 1e-06
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +1
Query: 622 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMXILTERGYSFTTTAEREIVR 801
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL +++ R Y+ E IV
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVN 216
Query: 802 DXKXKLCYV 828
+ K +CYV
Sbjct: 217 EIKESVCYV 225
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +3
Query: 363 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQNHV 542
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 543 RNIQ 554
+++
Sbjct: 123 ESLR 126
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +1
Query: 538 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 717
MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSG 180
Query: 718 RDLTDYLMXILTERGY 765
+ D L L ++ +
Sbjct: 181 NAINDILAQTLRDKNF 196
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 176 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 280
+EV+A+V+D GS + GF+G+D P+ V PS G+
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGE 43
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 46.4 bits (105), Expect = 5e-06
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 309 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 485
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 486 TEAPLNPKANREKMTQ 533
TE NP R MT+
Sbjct: 121 TEPLANPTYVRSTMTE 136
Score = 45.6 bits (103), Expect = 9e-06
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 535 IMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 708
++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+
Sbjct: 137 LLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRIS 196
Query: 709 LAGRDLTDYLMXILTERGYSF 771
G + YL+ + + SF
Sbjct: 197 WGGSQSSSYLLKLFQIKYPSF 217
Score = 30.7 bits (66), Expect = 0.28
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVF 262
LV+DNGS +AG+ G+ P+ VF
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVF 50
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 45.6 bits (103), Expect = 9e-06
Identities = 24/72 (33%), Positives = 37/72 (51%)
Frame = +1
Query: 541 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 720
FE P +A + ++ LYA G G+V+D G + PI +G + A +L L GR
Sbjct: 170 FEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGR 229
Query: 721 DLTDYLMXILTE 756
+T +L +L E
Sbjct: 230 YMTQHLQNLLRE 241
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +3
Query: 378 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQ 533
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQ 167
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 282 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 455
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 456 VAPEEHPVLLTEAPLNPKANREKMTQ 533
V P E+ +++TE NP++ R+++ +
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQIME 122
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +2
Query: 176 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG-KAPPSGRD 301
EE+ +LV+D GS + G+AG+++P + PS G ++ +GR+
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRN 50
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +2
Query: 563 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 697
P T+P P T PV P S P+ P P PS+ P PS
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 560 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 697
PP +P P P VPP P+T P P PS P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPP-----PSTAPPVPTPSAGLPPVPVPT 1233
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +2
Query: 560 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTRDTHSPTPS 697
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 26.6 bits (56), Expect = 4.5
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Frame = +2
Query: 461 PRGTPSPAH*GSPQPQGQQREDDPESCSKHSTRPPCTSPSKPCSRCTRPV--VPPVSCWT 634
P PS A P P G P + PP +PS +P VPPV
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAA-----PPVPAPSSGIPPVPKPAAGVPPVP--P 1193
Query: 635 PATVSPTPCPSTRDTHSPTPS 697
P+ P P PS P PS
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPS 1214
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.1 bits (67), Expect = 0.21
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 536 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 697
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 29.9 bits (64), Expect = 0.48
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 536 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 697
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 473 PSPAH*GSPQPQGQQREDDPESCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP 652
P PA S SC+ ++ PP + + P + P VPP S TP T
Sbjct: 371 PPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT-- 424
Query: 653 TPC-PSTRDTHSPTP 694
T C ST ++ TP
Sbjct: 425 TNCTTSTSVPYTSTP 439
Score = 27.5 bits (58), Expect = 2.6
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 536 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSPTPS 697
SC+ ++ P T S S P VPP S T + PT ST SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.5 bits (58), Expect = 2.6
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 530 PESCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 697
P S S ST PP S S + + + SC T ++ PT +T T + P+
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 530 PESCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 697
P S S ST PP S S + + SC T ++ PT +T T + P+
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 29.9 bits (64), Expect = 0.48
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 441 YNELRVAPEEHPVLLTEAPLNPKANRE-----KMTQNHVRNIQHARHVRRHPSRALAVRV 605
Y++L + +E V TE+ N A R K+T +RN+ H+ + + +A+R
Sbjct: 182 YHDLHIEIDEEDVPSTESRGNLNARRPQSGLLKITVGSLRNVTHSAGISKQTEMIVAIRA 241
Query: 606 RSYHRYR 626
R R
Sbjct: 242 EDLERAR 248
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 584 PCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSP 688
PC+ + PPV+C TP P C + H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 584 PCSRCTRPVVPPVSCWTPATVSPTPCPST 670
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 560 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 667
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.5
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +2
Query: 467 GTPSPAH*GSPQPQGQQREDDPESCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATV 646
G +PAH S P Q P+ + PP + P P + PP+ P +
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA-------PPMPA-GPPSA 1730
Query: 647 SPTPCPSTRDTHSPTP 694
P P P++ P P
Sbjct: 1731 PPPPLPASSAPSVPNP 1746
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = -2
Query: 324 SPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEP 205
+P VP P RP P R A AL +P+P
Sbjct: 538 APEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQP 577
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 6 GSKSTSTPTHASKHCVEQGHRPAIG 80
G K+T+TPT SKH V++ H +G
Sbjct: 125 GKKATATPTPKSKH-VQRKHSARLG 148
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = -2
Query: 354 FCSVPHLLHKSPSVPYRPSRPDGGAFPRXEGNTARGASSPAKPALHIPEPLSTTNAATSS 175
F S+P + K P+ P P + + A +S+P P P+ + ++TSS
Sbjct: 193 FSSLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINP--RAPQTRRESISSTSS 250
Query: 174 SH 169
H
Sbjct: 251 IH 252
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 498 LNPKANREKMTQNHVRNIQH-ARHVRRHPSRALAVR 602
++PK N K+ + +R++QH +R+ R P L++R
Sbjct: 58 VDPKKNSLKIKISDIRDVQHTSRYFRSSPKIRLSLR 93
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 345 VPHLLHKSPSVPYRPSRPDGGA 280
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 498 LNPKANREKMTQNHVRN 548
L+PKAN EKM+Q H N
Sbjct: 48 LHPKANIEKMSQGHPLN 64
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 218 TYRSHCLLPTRQLLRRTS*ISEI 150
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 374 FEGQDTSFALCLISYIRVLLSHTDHHA 294
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 6 GSKSTSTPTHASKHCVEQGHRPAIG 80
G K+TSTP SKH V++ H +G
Sbjct: 125 GKKATSTPNPKSKH-VQRKHSARLG 148
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 566 CTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT 709
C +PS+ C + PV + T S TP P+T + +PTP+ T
Sbjct: 825 CYNPSQ--YGCDNGALGPVQS-SSTTSSITPTPTTTSSITPTPTTTST 869
>SPAC25B8.11 |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 25.8 bits (54), Expect = 7.8
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +2
Query: 476 SPAH*GSPQPQGQQREDDPESCSKHSTRPPCTSPSKPCSRCTRPVVP 616
+P++ G+ +P ++ ++C +R S PC CT+ +P
Sbjct: 7 TPSNNGTERPYRSRKTRPCDNCRLRKSRCVVESIGNPCLLCTQLKIP 53
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,564,237
Number of Sequences: 5004
Number of extensions: 79783
Number of successful extensions: 300
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 424464280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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