Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G17
(849 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 409 e-114
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 409 e-114
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 408 e-114
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 407 e-114
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 305 2e-83
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 222 2e-58
SB_54| Best HMM Match : Actin (HMM E-Value=0) 221 8e-58
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 3e-57
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 205 4e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 5e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 5e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 81 8e-16
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 71 9e-13
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 44 2e-04
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 43 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.003
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.096
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.13
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.39
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.89
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.6
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.6
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.6
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.6
SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94) 30 2.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.1
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.1
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 30 2.7
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.7
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 30 2.7
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.6
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 4.8
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_56014| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 29 6.3
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 6.3
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 29 6.3
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 6.3
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 6.3
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 8.3
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 8.3
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 8.3
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 8.3
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 8.3
SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9) 28 8.3
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 8.3
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 8.3
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 28 8.3
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 409 bits (1007), Expect = e-114
Identities = 191/196 (97%), Positives = 194/196 (98%)
Frame = +1
Query: 193 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 372
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 91
Query: 373 NELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGI 552
NELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 92 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 151
Query: 553 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 732
V+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 152 VMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 211
Query: 733 IKEKLCYVALDFEQEM 780
IKEKLCYVALDFEQEM
Sbjct: 212 IKEKLCYVALDFEQEM 227
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 224
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
LEK Y LPDGQVITI
Sbjct: 236 LEKSYELPDGQVITI 250
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 409 bits (1007), Expect = e-114
Identities = 191/196 (97%), Positives = 194/196 (98%)
Frame = +1
Query: 193 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 372
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 373 NELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGI 552
NELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152
Query: 553 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 732
V+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 153 VMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Query: 733 IKEKLCYVALDFEQEM 780
IKEKLCYVALDFEQEM
Sbjct: 213 IKEKLCYVALDFEQEM 228
Score = 76.2 bits (179), Expect = 3e-14
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 224
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
LEK Y LPDGQVITI
Sbjct: 237 LEKSYELPDGQVITI 251
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 408 bits (1005), Expect = e-114
Identities = 190/196 (96%), Positives = 194/196 (98%)
Frame = +1
Query: 193 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 372
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 373 NELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGI 552
NELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152
Query: 553 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 732
V+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 153 VMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 212
Query: 733 IKEKLCYVALDFEQEM 780
IKEKLCYVALDFEQEM
Sbjct: 213 IKEKLCYVALDFEQEM 228
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 224
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
LEK Y LPDGQVITI
Sbjct: 237 LEKSYELPDGQVITI 251
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 407 bits (1002), Expect = e-114
Identities = 191/197 (96%), Positives = 194/197 (98%)
Frame = +1
Query: 193 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 372
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 32 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 91
Query: 373 NELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGI 552
NELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 92 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 151
Query: 553 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 732
V+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD
Sbjct: 152 VMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 211
Query: 733 IKEKLCYVALDFEQEMA 783
IKEKL YVALDFEQEMA
Sbjct: 212 IKEKLAYVALDFEQEMA 228
Score = 68.9 bits (161), Expect = 5e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 224
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
LEK Y LPDGQVITI
Sbjct: 236 LEKSYELPDGQVITI 250
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 305 bits (750), Expect = 2e-83
Identities = 156/196 (79%), Positives = 160/196 (81%)
Frame = +1
Query: 193 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 372
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFY 92
Query: 373 NELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGI 552
NELRVAPEEHPVLLTEAPLNPKANREKMT IMFETFN+PAMYVAIQAVLSLYASGRTTGI
Sbjct: 93 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI 152
Query: 553 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRD 732
V+DS G + H + I ERGYSFTTTAEREIVRD
Sbjct: 153 VMDS------------GDGVSHTV---------------PIYEERGYSFTTTAEREIVRD 185
Query: 733 IKEKLCYVALDFEQEM 780
IKEKLCYVALDFEQEM
Sbjct: 186 IKEKLCYVALDFEQEM 201
Score = 71.7 bits (168), Expect = 7e-13
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 224
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
+EK Y LPDGQVITI
Sbjct: 210 IEKSYELPDGQVITI 224
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 222 bits (543), Expect = 2e-58
Identities = 105/198 (53%), Positives = 139/198 (70%), Gaps = 3/198 (1%)
Frame = +1
Query: 193 PRIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT 366
P +VGRP R + + KD VGDEA R +L + YP+++GIV NWDDM+ +W +T
Sbjct: 33 PSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYT 92
Query: 367 F-YNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRT 543
F +++ + P VLLTE PLNP NREKM +MFE + +Y+AIQAVL+LYA G
Sbjct: 93 FGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLL 152
Query: 544 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 723
TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E
Sbjct: 153 TGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFET 212
Query: 724 VRDIKEKLCYVALDFEQE 777
VR +KEKLCYV + EQE
Sbjct: 213 VRMMKEKLCYVGYNIEQE 230
Score = 36.7 bits (81), Expect = 0.024
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 114 AALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 209
+ +V DNG+G K G+AG + P +FPS G+
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGR 38
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 221 bits (539), Expect = 8e-58
Identities = 97/144 (67%), Positives = 122/144 (84%)
Frame = +1
Query: 349 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLY 528
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M +MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 529 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 708
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 709 AEREIVRDIKEKLCYVALDFEQEM 780
AE++I+RD+KE LCY A+D+E+E+
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYEREL 2272
Score = 45.2 bits (102), Expect = 7e-05
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 209
+V+DNGSG CKAG + D++PR VFP+ G+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGR 2126
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 219 bits (534), Expect = 3e-57
Identities = 104/113 (92%), Positives = 109/113 (96%)
Frame = +1
Query: 442 NREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 621
N + M IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 622 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 780
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 190
Score = 121 bits (292), Expect = 6e-28
Identities = 55/59 (93%), Positives = 55/59 (93%)
Frame = +1
Query: 193 PRIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 369
P IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 32 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGKAPPSG 224
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
LEK Y LPDGQVITI
Sbjct: 199 LEKSYELPDGQVITI 213
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 205 bits (500), Expect = 4e-53
Identities = 96/106 (90%), Positives = 102/106 (96%)
Frame = +1
Query: 463 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 642
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 643 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 780
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 5e-43
Identities = 74/116 (63%), Positives = 100/116 (86%)
Frame = +1
Query: 397 EHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 576
+HPVLLTEAPLNP+ NREK + FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 577 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 744
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (252), Expect = 5e-23
Identities = 47/126 (37%), Positives = 79/126 (62%)
Frame = +1
Query: 307 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNT 486
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T +MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 487 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 666
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 667 MKILTE 684
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 81.4 bits (192), Expect = 8e-16
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +1
Query: 508 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 684
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 685 RGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 780
RG++FT+++ +IV DIKEK+CY++ D +E+
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEV 858
Score = 39.9 bits (89), Expect = 0.003
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +3
Query: 90 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRG 206
FK+ A+V+DNG G+ K GFAGD PR + P+ G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVG 731
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 71.3 bits (167), Expect = 9e-13
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 475 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 651
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 652 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 783
+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 235 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 414
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.51
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 544 TGIVLDSGDGVSHTVPI 594
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSXRGK 209
E LV+D GS M K GFAGDDAP+ VFP G+
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGR 1388
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 43.2 bits (97), Expect = 3e-04
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Frame = +1
Query: 256 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 429
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 430 NPKANREKMTHIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 591
+ M I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 592 IYEGYALPHAILR 630
++ G + A+ R
Sbjct: 373 VFNGKVIKKAVRR 385
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 352 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYA 531
I H F + L+V P +H V++T +E++ I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 532 SGRTTGIV 555
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -2
Query: 194 GEHGARSIISCETGLAHTGAIVYYQRGNFFV 102
GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 9 GENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.096
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 488 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 461 ISCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTRDTHSPTPSC 628
+ CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1519 VGCSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 476 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 589
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 491 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 589
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +2
Query: 476 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 625
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 473 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSP--TPS 625
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.1 bits (62), Expect = 4.8
Identities = 34/91 (37%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +2
Query: 365 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXISCSKHSTRPPCTSPSKPCSRCTRPVVP 544
PST S S PR T S I+ S ST PCT S P + T P P
Sbjct: 21 PSTPSTPSTPR-TPSTPSTPCTPSTPSTPSTPITPSTPST--PCTH-STPSAPST-PSTP 75
Query: 545 PVSCW--TPATVSPTPCPSTRDTHS--PTPS 625
C TP+T S PST T S TPS
Sbjct: 76 STPCTPSTPSTPSTPSTPSTPSTPSAPSTPS 106
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +2
Query: 497 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTP 622
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 488 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 625
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 32.7 bits (71), Expect = 0.39
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +3
Query: 429 QPQGQQREDDPYHVRNIQ------HARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRA 590
+ + ++ ++ P H R++ + RR S A R RS R R+ RRR
Sbjct: 182 EEEEEEHKESPVHHRSLSPEPRRGYRDQRRRSHSPAHHRRSRSRSRSRSPRRRRRSRSPR 241
Query: 591 HLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNRS 728
R R+P H S SRSR R P R+R H R+ + S
Sbjct: 242 RRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSRSPTHRRHRSRSHS 286
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/88 (23%), Positives = 31/88 (35%)
Frame = +2
Query: 362 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXISCSKHSTRPPCTSPSKPCSRCTRPVV 541
+PS M C PP S + + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 542 PPVSCWTPATVSPTPCPSTRDTHSPTPS 625
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +2
Query: 491 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 616
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +2
Query: 467 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 589
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 491 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 589
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 488 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 482 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Frame = +2
Query: 365 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXISCSKHSTRPPCTSPSKPCSRCTRPVVP 544
P+T S +P + T + + S T +P+KP P P
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTP 115
Query: 545 PVSCWTPATVSP-TPCPS--TRDTHSPT 619
+ TP +P TP P+ T H+PT
Sbjct: 116 TPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 488 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 625
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +2
Query: 482 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTPS 625
T+P T+P+ T P S P +PTP P+T +PTP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 488 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 583
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 298 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 450
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.89
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 644 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 465
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 464 IWVIFSLLALGLR 426
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 644 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 507
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 644 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 507
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 485 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHS 613
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 476 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 622
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 439 ANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 555
A +E++ I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 584 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 432
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 431 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 267
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_52278| Best HMM Match : Ery_res_leader1 (HMM E-Value=0.94)
Length = 592
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 1/109 (0%)
Frame = +3
Query: 462 YHVRNI-QHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGL 638
Y R + Q RRHP R R+ + G+R R P +R RT R +
Sbjct: 349 YRTRQVSQRGERERRHPPGVAICRYRTRQVSQRGVRERRNPPGVAIRRYRT--RQVSQRG 406
Query: 639 SRSRPHRLPHEDPHRARLLVHYHRRAGNRS*HQGEAVLRRS*LRAGDGT 785
R R H P R R R R H G A+ R + G+ T
Sbjct: 407 ERERRHH-PGVAICRYRTRQVSQRGKRERRHHPGVAICRYRTRQTGEST 454
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 476 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 479 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 479 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 479 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRD--THSPTPSCVWT*P 643
+T P T+P+KP + T P + PAT +PT +T T +PT S T P
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP 182
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 479 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 503 PSKPCSRCTRPVVPP 547
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 534 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHE 671
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 491 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 589
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 491 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 595
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 29.9 bits (64), Expect = 2.7
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
Frame = -1
Query: 777 LLLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVATG*VQTQDGVGECVS- 601
+++ V V ++L V + G G + + + +D V + A G V GVG+
Sbjct: 15 MVVSVMMVVLVMMLMVRDSDDGGVGDDAIGRVSDD--GGVGDDADGRVSDDGGVGDDADG 72
Query: 600 -LVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHG 490
+ D GVGD G D GG GRV + G+ D G
Sbjct: 73 RVSDDGGVGDDADGRVSDDGGVGDNAEGRVSDDGGVGDDAIG 114
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 488 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 622
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 427 LNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 555
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 423 SPQPQGQQREDDPYHVRNIQHARHVRRHPSR 515
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 497 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 601
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 160 SQEMMLLAPCSPRIVGRPRHQGVMVGMGQKDSYVGDEAQ 276
S E + APCSPR +P G M G G + S+V +E +
Sbjct: 803 SLESSIEAPCSPRSASKPVISGEMNG-GPRASHVIEETE 840
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 524 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 461 ISCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT--PCPSTRDTHSPTPSC 628
+ CS+ +T PP T+ S T+ + TP T T PC T +P +C
Sbjct: 618 VDCSRPTT-PPVTTTKSTTSSTTKGTTASTTTSTPTTTPTTRPPCNLHCQTLNPDGTC 674
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +2
Query: 497 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 634
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_56014| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 300
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 4 SVSXFSRLAVTAGRLIFILSHLHLTNF-TNSRCATKKLPRW**TMAPVCARPVSQEMMLL 180
S+S + LAV+A R+I + HL T+ TN+R + W T+ C ++ ++L
Sbjct: 110 SISMVTLLAVSADRVIALYLHLRYTSIVTNNRVVKLHIIIWTVTVPFTCLSLLASHSVML 169
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +2
Query: 503 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PV 646
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 441 QQREDDPYHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAH----LRGIR 608
Q R+ PY + Q R V+ P+ S HR + R+C P+R H +R ++
Sbjct: 716 QHRQCVPYRLYPTQTVRTVQTLPN------TDSAHRTDSTQHRQCAPYRLHPAQTVRTVQ 769
Query: 609 TPPRHPASGLSRSRPHR 659
T P ++ + S HR
Sbjct: 770 TLPSTDSAHRTHSTQHR 786
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 473 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 622
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 500 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 622
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 578 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 405
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 404 G 402
G
Sbjct: 147 G 147
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 456 DPYHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 623
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +2
Query: 497 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 637
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 485 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 622
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 579 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 680
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 527 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 631
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_47874| Best HMM Match : Keratin_B2 (HMM E-Value=4.9)
Length = 253
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 243 SHTDHHALMAGPSHDXRGTRREEHHLLRNRPCTYRSH 133
SHTDHH L + H+ + +HH+L N +SH
Sbjct: 188 SHTDHHVL-SNTDHNVQS--HTDHHVLSNTDHHVQSH 221
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 473 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 625
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +3
Query: 477 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTP----PRHPASGLSR 644
I H++ RH S+ L R R HR + RR H+ + P P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 645 SRPH 656
+PH
Sbjct: 1648 GKPH 1651
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 464 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTRDTHSPTPS 625
+C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 39 TCTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 803 LEKXYXLPDGQVITI 847
LEK Y LPDGQVI+I
Sbjct: 10 LEKTYELPDGQVISI 24
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,043,766
Number of Sequences: 59808
Number of extensions: 742218
Number of successful extensions: 3034
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 2434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2975
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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