Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G16
         (844 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    36   0.002
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.9  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   6.7  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 12/23 (52%), Positives = 19/23 (82%)
 Frame = +1

Query: 352 IPYPVEKKIPYPVKVHVPQPYPV 420
           +P+PV   +P+ VKV++PQPYP+
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPL 200



 Score = 30.3 bits (65), Expect = 0.077
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 6/28 (21%)
 Frame = +1

Query: 355 PYPVEKKIPYPV------KVHVPQPYPV 420
           PYP+E + P+PV      +V VP+PYPV
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258



 Score = 28.7 bits (61), Expect = 0.23
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 352 IPYPVEKKIPYPVKVHVPQPYPVCQTCPLP 441
           +PY VEK  PYP++V  P P  V +   +P
Sbjct: 224 VPYTVEK--PYPIEVEKPFPVEVLKKFEVP 251



 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 352 IPYPVEKKIPYPVKVHVPQPYPVCQTCPLP 441
           IP  +EK +PY V     +PYP+    P P
Sbjct: 216 IPKVIEKPVPYTV----EKPYPIEVEKPFP 241



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 550 KVYVPEPYP 576
           KVY+P+PYP
Sbjct: 191 KVYIPQPYP 199



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 355 PYPVEKKIPYPVKVHVPQPYPVCQTCPLP 441
           PYP++  +  P+K+ + +  P     P+P
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVP 225


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 361 PVEKKIPYPVKVHVPQPYPV 420
           PV   +PYP+ + +P P PV
Sbjct: 625 PVTILVPYPIIIPLPLPIPV 644



 Score = 23.8 bits (49), Expect = 6.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 352 IPYPVEKKIPYPVKVHVP 405
           +PYP+   +P P+ V +P
Sbjct: 630 VPYPIIIPLPLPIPVPIP 647


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 498 RRCLTQYMSQFDRPVPVQGICARTLP 575
           R+C    M Q    VP +G+C +T P
Sbjct: 278 RKCPKGKMPQNSECVPCKGVCPKTCP 303


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
 Frame = +3

Query: 369 KENPLPRESARSPTLPRLSNMSLTQLKRLSRYQFTYRNPTQSKRRCLTQYMSQFDRPVPV 548
           +E   P ++ R     +L   S  +   L    +T         R L      FD PVP 
Sbjct: 65  EETQPPNDAGRDRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKFSFDEPVPQ 124

Query: 549 Q--GICARTLPRLKRK 590
           +     A   P+ +RK
Sbjct: 125 KPDNAAAEGAPKPQRK 140


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,177
Number of Sequences: 2352
Number of extensions: 11522
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)