Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G16
         (844 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator...    32   3.0  
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.        32   3.0  
BC002561-1|AAH02561.2|  659|Homo sapiens PPRC1 protein protein.        32   3.0  
AL500527-6|CAH72219.1|  631|Homo sapiens peroxisome proliferator...    32   3.0  
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator...    32   3.0  
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa...    32   3.0  
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.     32   3.0  

>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
            proliferator-activated receptor gamma,
            coactivator-related 1 protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294  PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
            P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 1095 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1144


>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
          Length = 1542

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294  PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
            P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 975  PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1024


>BC002561-1|AAH02561.2|  659|Homo sapiens PPRC1 protein protein.
          Length = 659

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
           P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 100 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 149


>AL500527-6|CAH72219.1|  631|Homo sapiens peroxisome
           proliferator-activated receptor gamma,pus laevis)
           protein.
          Length = 631

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294 PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
           P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 62  PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 111


>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
            proliferator-activated receptor gamma,pus laevis)
            protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294  PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
            P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 1095 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1144


>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
            protein.
          Length = 1664

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294  PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
            P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 1095 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1144


>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
          Length = 1666

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 294  PQNRNCR*ESSRSLPRRKAHPLPGRKENPLPRESARSPTLPRLSNMSLTQLKRLS 458
            P +   + E+  + PR K  PLP  K  P PR+S    T+P+L  +   +L++LS
Sbjct: 1097 PASERLKPETQETRPREKP-PLPATKAVPTPRQS----TVPKLPAVHPARLRKLS 1146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,831,176
Number of Sequences: 237096
Number of extensions: 1911840
Number of successful extensions: 5232
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5170
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)