Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_G15
         (856 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         28   0.42 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             25   2.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   6.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   9.0  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 27.9 bits (59), Expect = 0.42
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 314 QSSPRETVATHQGQRWLRVHPRRPRLRSVTNCWRT-KSKLQLVLVPLPHCQSSFPPTTPA 490
           ++SP   + T +G+RW    PR P     T+CW + +S+L ++ + L    SS   +T  
Sbjct: 11  RASPSRPILTTRGRRW----PRPP-----TSCWPSRRSRLCIIALSLTLSSSSCKQSTSL 61

Query: 491 S 493
           S
Sbjct: 62  S 62


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/74 (20%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
 Frame = +1

Query: 601 VGASEATLLNMLNISPFS-YGLVVKQVYDSGT--IFAPEILDIKPEDLRAKFQAGVANVX 771
           VG +E+   +++N+  F+ Y + +  +Y +G   +     + +KPED+    +A   +  
Sbjct: 261 VGVTESA--DLINLEKFAQYAVAIAAMYKTGLGKLSEKATVKVKPEDVPLNLRAHDVSTH 318

Query: 772 ALSLAXGYXLLXSP 813
           +++L+    +  +P
Sbjct: 319 SMTLSWAPPIRLNP 332


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 222 SRSVSRYVAPVSCSWEKTQWCAK 290
           + S+ RY APV       QWC +
Sbjct: 790 AESIIRYAAPVWSEATDLQWCQR 812


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 205 GLATDAADPYLATWLQYRAHGKKHNGAQSHQR 300
           G ATD  +  LA   Q + H  +H   Q HQ+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQ 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 915,851
Number of Sequences: 2352
Number of extensions: 18105
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)