Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_G15
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 203 1e-52
AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium chann... 31 1.4
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 29 4.2
U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 28 9.7
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 203 bits (495), Expect = 1e-52
Identities = 96/152 (63%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
Frame = +1
Query: 379 ETSXEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTI 558
E E+R KLLEN+ APA+ GAIAP V +P NTG+GPEKTSFFQAL IPTKI++GTI
Sbjct: 93 EDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTI 152
Query: 559 EIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLR 738
EI+NDVH++K GDKVGASE+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+ E+LR
Sbjct: 153 EILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELR 212
Query: 739 AKFQAGVANVXALSLAXGYXLLXSPA-XIANG 831
+F +GV NV ++SLA Y L S A +ANG
Sbjct: 213 KRFLSGVRNVASVSLAVNYPTLASVAHSLANG 244
Score = 108 bits (260), Expect = 4e-24
Identities = 44/74 (59%), Positives = 62/74 (83%)
Frame = +2
Query: 101 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 280
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 281 VRKAIKDHLXQQSS 322
+RKA++ HL + S
Sbjct: 61 IRKALRGHLGKNPS 74
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +3
Query: 315 NPALEKLLPHIKGNVGFVFTRGDL 386
NP+LEKLLPHI NVGFVFT+ DL
Sbjct: 72 NPSLEKLLPHIVENVGFVFTKEDL 95
>AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium channel,
beta subunit protein2 protein.
Length = 357
Score = 30.7 bits (66), Expect = 1.4
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 6/154 (3%)
Frame = +2
Query: 14 SHFAFVPHGSRAFCLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVG 193
S F FVP R ++ P + +D++ W+ K++ P ++G
Sbjct: 111 SEFGFVPTARRLANYMVS-DEDPPVKHNTSDHQDRSIWEPKCPYKVVP--SSRP-IVLLG 166
Query: 194 ADNVGSQQMQQIRISLRGSSIVLMGKNTMVRKAIKDHLX--QQSSPRETVATHQGQRWLR 367
S+ Q + ++LR + GKN K +K + QQS R+ G RWLR
Sbjct: 167 PTLQHSRLTQLLHLALREEILKHFGKNM---KYVKSDIGSGQQSGDRK------GARWLR 217
Query: 368 V---HPR-RPRLRSVTNCWRTKSKLQLVLVPLPH 457
+ R + + V R SKL L+LV PH
Sbjct: 218 GLRDYDRGQDENQEVELIMRMTSKLHLLLVDSPH 251
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 74 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 253
R +L+++ ++ K T K+N ++ +D+Y FI N+ S + IR + +S
Sbjct: 6 RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64
Query: 254 IVLMGKNTMVRKAI 295
GKN ++ A+
Sbjct: 65 RFFFGKNNVISIAL 78
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 358 LASCSPAETSXEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPT 537
L++CSP +L +Q A A+ L+ +P TGL P + FQAL P
Sbjct: 28 LSNCSPYFLQDFTH--VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPR 83
Query: 538 KISKGT 555
I+ T
Sbjct: 84 SIAPRT 89
>U53154-2|AAC25856.1| 358|Caenorhabditis elegans Hypothetical
protein C33G8.12 protein.
Length = 358
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 56 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 169
L+ K S ++ +SR+ +EDK + SN+++K QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 445 HQDELELGLCSPT-VCHGPQXRSPRVNTKPTL 353
HQ++ + SPT V HG + +SP V KP++
Sbjct: 433 HQEDCSIRPSSPTSVSHGSRPQSPAVPKKPSV 464
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 445 HQDELELGLCSPT-VCHGPQXRSPRVNTKPTL 353
HQ++ + SPT V HG + +SP V KP++
Sbjct: 433 HQEDCSIRPSSPTSVSHGSRPQSPAVPKKPSV 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,976,057
Number of Sequences: 27780
Number of extensions: 428747
Number of successful extensions: 1254
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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